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Detailed information on CNT30572973


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SFF9|GL17_ARATH, E-value = 3e-87

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297939Vitis viniferaTriticum aestivum12.5923.5885.7191forward
CNT30223440Vitis viniferaHordeum vulgare15.0826.5981.65109forward
CNT30401458Vitis viniferaTriticum turgidum11.7621.4685.8885forward
CNT30586666Vitis viniferaMusa acuminata21.7220.4782.17157forward
CNT30665085Vitis viniferaTriticum dicoccoides15.0829.0783.49109forward
CNT30118305Vitis viniferaCitrus clementina25.7325.1481.18186forward

Expression of CNT30572973

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MGGFDPNTASAMVITPGFWLFRPAMATALVCPMLNWK*

Sequence

>CNT30572973
CTGGTAGCTTCTTAATTTTCTATATTTTCCAACTAGAATAGTGCTTGAAGGTATTCAACCACCTTCTTGTCCAACTGGAAGGCCCTGGCAAGGAAATCAG
GATTGATGGGTGGATTTGATCCAAACACTGCATCGGCTATGGTGATTACACCTGGATTTTGGCTGTTCAGACCAGCAATGGCTACTGCATTAGTGTGCCC
AATGTTGAATTGGAAGTGAATGAGACCTATAGGGAACACAAAAACATCTCCCTTGTTGAGGACTTTGCTAAAGAGGCGGTTTTGAGGGTTGGATGTGACA
AAGCCAACTAAGAGTGTTCCCTCCAAGACAGTGAGGATCTCAGTGGCACGAGGGTGAGTGATCATGCGGTTTTGAGGGTTGGATGTGACAAAGCCAACTA
AGAGTGTTCCCTCCAAGACAGTGAGGATCTCAGTGGCACGAGGGTGAGTGTGAGGAGGGTTTTGACCATAGGGTGCATAATCGATACGAACCAGTGATAT
CCCAAGAGTGTTAAGTCCTGGTATTGCATCAACATTTACTGTAGTGACATTTGAGCCCACTCGATTTGCTGTGTTTCCTGGAATATTCAGCCCTTGAAAG
AAGAAATCCTCGGCCACAGTCAGGTTTGGGTTCTTGCAGAACTTTCCATTTACAAACACTGCATTTAAACAAAAAAAAAAAAAAGGGAAAAGAAAAGATA
GGTCATTCGTATCAAACCACCAT