Detailed information on CNT30572839


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHJ8|SAP5_ARATH, E-value = 3e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533125Vitis viniferaEucalyptus grandis51.224.6287.5128forward
CNT30514234Vitis viniferaJuglans regia56.45.1885.11141forward
CNT3091054Vitis viniferaSolanum tuberosum69.218.8780.92173forward
CNT30444092Vitis viniferaAegilops tauschii31.29.6484.6278forward
CNT30449351Vitis viniferaSaccharum spontaneum3613.6285.5690forward
CNT30714645Vitis viniferaMalus domestica golden28.813.2887.572forward
CNT30330555Vitis viniferaDioscorea rotundata31.225.2485.978forward
CNT30725462Vitis viniferaLupinus angustifolius68.820.779.65172forward

Expression of CNT30572839

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLSAEQVPAPAPESGEPDLPPASRAPIHLPLHLPDLLHRRS*

Sequence

>CNT30572839
GAGGCAGATGAAAATGCAGATCCAGCTTTCACTACCGGATTTTCCCGCGCGATAGCCTCGCGACCGGCGGTCTTGTAATCGTAGCTGCACTCGTGCCGAT
CCGTGTACCGATGCTCAGCGCAGAACAGGTCCCCGCACCGGCACCGGAATCCGGTGAGCCCGACCTTCCTCCTGCATCCAGAGCACCGATTCACCTCCCG
CTTCACCTTCCCGACCTCCTCCACCGCCGCAGCTGAGGCAGCGTCCTTCG