CANTATAdb - search

Detailed information on CNT30571858

BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 5e-14

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696398	Vitis vinifera	Oryza sativa	13.88	100	97.3	481	reverse complement
CNT30670969	Vitis vinifera	Setaria viridis	29.31	89.04	98.92	1016	forward
CNT30524649	Vitis vinifera	Setaria italica	34.48	36.26	98.66	1195	reverse complement
CNT30641383	Vitis vinifera	Nymphaea colorata	40.42	44.85	94.86	1401	reverse complement
CNT30550219	Vitis vinifera	Ipomoea triloba	42.93	34.27	99.33	1488	reverse complement
CNT30702366	Vitis vinifera	Quercus lobata	28.74	100	99.6	996	forward
CNT30378673	Vitis vinifera	Arabidopsis thaliana	20.6	57.26	98.6	714	forward
CNT30619000	Vitis vinifera	Sesamum indicum	38.17	43.31	96.75	1323	reverse complement
CNT30283003	Vitis vinifera	Chenopodium quinoa	26.57	96.44	97.72	921	forward
CNT3020470	Vitis vinifera	Citrullus lanatus	9.78	62.89	99.12	339	forward
CNT30730372	Vitis vinifera	Corchorus capsularis	38.2	68.42	96.98	1324	reverse complement
CNT30632346	Vitis vinifera	Vigna unguiculata	39.24	48.62	99.41	1360	reverse complement
CNT30490123	Vitis vinifera	Olea europaea	39.27	78.17	94.2	1361	reverse complement
CNT30505560	Vitis vinifera	Nicotiana attenuata	39.96	62.64	98.99	1385	forward
CNT30712870	Vitis vinifera	Glycine max	21.64	45.13	97.6	750	reverse complement
CNT30157615	Vitis vinifera	Pistacia vera	13.42	63.35	95.48	465	reverse complement
CNT30637481	Vitis vinifera	Capsicum annuum	11.77	91.07	97.55	408	reverse complement
CNT30185187	Vitis vinifera	Secale cereale	41.52	40.68	97.71	1439	reverse complement
CNT30299053	Vitis vinifera	Triticum aestivum	41.52	40.16	97.36	1439	reverse complement
CNT30221907	Vitis vinifera	Hordeum vulgare	27.09	78.18	96.38	939	reverse complement
CNT30394721	Vitis vinifera	Triticum turgidum	41.52	39.28	97.64	1439	reverse complement
CNT30569654	Vitis vinifera	Actinidia chinensis	47.49	47.02	96.84	1646	reverse complement
CNT30543268	Vitis vinifera	Brassica napus	26.86	40.57	97.53	931	reverse complement
CNT30147396	Vitis vinifera	Medicago truncatula	40.28	46.92	99.21	1396	reverse complement
CNT30438197	Vitis vinifera	Aegilops tauschii	29.46	97.52	98.73	1021	reverse complement
CNT30258698	Vitis vinifera	Avena sativa	12	51.49	98.08	416	forward
CNT30670388	Vitis vinifera	Triticum dicoccoides	28.56	35.31	96.57	990	reverse complement
CNT30140161	Vitis vinifera	Lolium perenne	41.52	42.27	98.05	1439	reverse complement
CNT3017954	Vitis vinifera	Zea mays	41.72	38.16	97.23	1446	reverse complement
CNT30605068	Vitis vinifera	Gossypium raimondii	37.33	84.69	97.22	1294	forward
CNT30216563	Vitis vinifera	Kalanchoe fedtschenkoi	57.21	50.99	94.45	1983	reverse complement
CNT30655407	Vitis vinifera	Rosa chinensis	43.62	45.23	97.49	1512	reverse complement
CNT30208050	Vitis vinifera	Helianthus annuus	39.44	55.01	96.71	1367	reverse complement
CNT30628241	Vitis vinifera	Daucus carota	38.4	49.3	99.7	1331	forward
CNT30682011	Vitis vinifera	Triticum urartu	28.13	100	98.56	975	reverse complement
CNT30721631	Vitis vinifera	Triticum spelta	41.52	41.43	97.57	1439	reverse complement
CNT30346087	Vitis vinifera	Eragrostis tef	24.32	81.53	97.51	843	reverse complement
CNT30359520	Vitis vinifera	Lactuca sativa	38.2	52	98.41	1324	forward
CNT30429739	Vitis vinifera	Papaver somniferum	37.56	40.47	94.55	1302	reverse complement
CNT3057903	Vitis vinifera	Amborella trichopoda	33.96	49.12	92.95	1177	forward
CNT30108930	Vitis vinifera	Oryza longistaminata	25.07	37.14	97.81	869	reverse complement
CNT3038324	Vitis vinifera	Cucumis melo	41.66	76.56	97.85	1444	forward
CNT30499372	Vitis vinifera	Digitaria exilis	38.95	39.72	98	1350	reverse complement
CNT30603680	Vitis vinifera	Oryza punctata	41.52	36.46	97.98	1439	reverse complement
CNT30557400	Vitis vinifera	Panicum hallii	18.72	47.3	97.23	649	reverse complement
CNT30113381	Vitis vinifera	Ficus carica	13.01	101.12	95.34	451	forward

Expression of CNT30571858

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 2 (68 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKFQPC*

>peptide 3 (30 aa)
MKPGEKEVNTLLRIRVCFSSKPQSALARRY*

>peptide 4 (34 aa)
MTTVATINRLATMAGRYALLSRDPYSNQKTKGPY*

>peptide 5 (36 aa)
MGTNLQGYHLLWPDLPTFSQLQFTAPFTNRISSKGA*

Sequence

>CNT30571858
GGTAGTAATTGCGAATGAGCAAGTAGGGGGCGGCAACTAAAGAGGTAGCGAGACTGACCGCAATTGCAGGAATAGGTTGACTTTCTTTCATTTTGGTTAT
GGAAAGTGAAAGTAGTTTCGTTTAGTACGAGATCGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTTCTGTTCAAAAACCTCGTCCGAGA
ACTTGTATAGAGAAGGATTTCCCGCGGCGCAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTG
GCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCC
AACTCACGTACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTC
GATAAGAGCTCTTGGGAGTCATCAGCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCG
ACTTTCGTCTCTGTTCGACCAGTCGGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCACACCTC
CGTTACTCTTTAGGAGGCATCCGCCCCAGATAAACTACCCACCTCGCAGTGTCCCGCCCCCCCCGAATTCTCGGTGCGGCGGTTAGGCATCCTTAGACGA
AAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAGGTGCAC
GGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACACCATTCG
TGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATAACACTT
CTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTG
GTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAAGCGC
CCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTGGAAGTTTCAA
CCTTGTTGACTATGACAACAGTCGCGACTATAAACAGACTCGCGACTATGGCAGGGCGGTACGCTCTGCTCTCTCGCGACCCCTACTCTAATCAAAAGAC
TAAAGGCCCCTACTGAAGATTCAAAAGGCGAGCACTGAAATGAGAAAGGCTTGTAGACTCGTGACGTTGAACGACACATTCTAAAACGAAAGCGCACACT
AGAAAGTGCTTCGAAAGGTGTCAGCAGGTGCGCGGAGCCGGAGCCCGGCATGTTCGCCCGCTGGGCCGAGTCTGAAAGGCTTTGATGACTCAAGGTTCAT
ATTAGGGAAAGGAGAGTGAGGGGAAGAGGGGGCAGCCCTCGGCCCGATCATCCAATTCGCTCCAACAGACAGGCATGGTTCTGTAGTCAAAGCAACTTCG
TCACTTTCGTGTACCCATCGGACGGCAGCCCTTTCGGGGGTTCCTTAGGGACCGATTCACTCTGCGTAGATTGACTGAACGCAGAAAGCCTTCCACTGGC
AGGCGATCGTGTTTTTCACAGGATTTATCGTTACTCATGTCAGCATTCTCACTTCTGATATCTCCAGGTGTTGTCACCAAAAACCTTCCCCGATTGACAG
AACGTCCCGCTACTGACACTTGAAAAAGCAGCTTTCAAGGTCTCGTCGCTTCGGTGAATCACTTGAGCCCTGATACATTTTCGGTGCCATGGAGCTAGAC
CAGTGAGCTATTACGCTTTCTTCAAAGGATGGCTGCTTCCAAGCCCACCTCCTGGTTGTCATCGCTCGATCACTTCCTTTTCCACTAAGTGATTGCTTAG
GGACCTTAGCGTACGATCTGGGCTGTTTCCCTCTCGACTTTGGATCTTAGCACCCAAAAAGTCTGTCTGTACAAACGATCTAGGCCTGTATTCGGAGTTT
CCCTGGGGTTGGTAAGGCGAAATGGGGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGAAATAGATTTCGCGGA
AAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCACAAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCAGTAAG
AGCTCTCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTCAAATAGGAAGAACTAGAAGATTCCACCTCTGGAAAGCGCCTACACCTAATGGCTT
AAGCCGCTGTTCCCATTTCCTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCTTTACTAATAGAATCTAAAGTAAAGGCTCTAAGCT
CCGCTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAATAGGGTTCTTTTCACCTTTCCCTCACGGTACTTGTACGCTAT
CGGTCATTGAGGAATACTTAGGCTTAGAGGGTGGTCCCCCTTTCTCGCGTAAAAGCGATCAGAATTCGAACACGCCGCGTTTTACTGGGAAGGATCGAAC
CATGGGAACGAATCTACAGGGCTATCACCTTCTTTGGCCAGATCTTCCAACCTTTTCACAATTACAGTTCACTGCGCCCTTTACTAATAGAATATCCAGT
AAAGGGGCTTGAAAGCTTACCTTATTATTCGAATTTTAGAAAGGTTTGGAACCGGAGTTTTCGCCCCAACCGTTGTTAGGGGGTCGTTAGACCGTAGCTT
GCTGCTGAAAAACGTAATAGGCTAGCGCGGCTCGCTTCGCTCTTCAAGCTCCGCCCCCCTTATTCACCTTTGAATCTATAAAAAAAACCCTTTCCCATTC
TTATAATAATAAGGTAAGCTTTGAAGCCGTAGCTTGCTGGTTTTTCCATCATCCAATCCACATCGAATGAAACCTGGCGAAAAAGAAGTGAACACTTTGC
TGAGGATTCGTGTTTGTTTTTCTTCAAAGCCCCAATCCGCTCTCGCTCGCCGCTACTAACGGGGTCTCGGTTGATTTCCCTTCCTTTAGCTACTCAGATG
TTTCAGTTCGCTAAGTTTGAAAAGTCCAAAGAGCGCAGACTAGCCACGGAGCTTGGATACGGTTTC