Detailed information on CNT30571801


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-14

BLAST vs NONCODE:
NONVVIT003033, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670689Vitis viniferaSetaria viridis72.4988.3399.05946forward
CNT30730494Vitis viniferaCorchorus capsularis1928.1883.06248reverse complement
CNT30712072Vitis viniferaGlycine max24.5250.4795.62320reverse complement
CNT30162096Vitis viniferaPistacia vera9.5842.09100125forward
CNT3089926Vitis viniferaSolanum tuberosum26.8215.8298.29350forward
CNT30508923Vitis viniferaSolanum lycopersicum23.0790.12100301reverse complement
CNT30554477Vitis viniferaOryza glaberrima55.410097.93723forward
CNT30258490Vitis viniferaAvena sativa28.0550.6998.63366reverse complement
CNT30605073Vitis viniferaGossypium raimondii76.0965.3399.3993forward
CNT3067980Vitis viniferaLeersia perrieri12.3453.4996.89161forward
CNT30202530Vitis viniferaHelianthus annuus50.7390.3198.79662reverse complement
CNT30369921Vitis viniferaOryza glumipatula17.3998.799.12227reverse complement
CNT30484250Vitis viniferaChara braunii14.4826.0394.71189forward
CNT30320583Vitis viniferaAsparagus officinalis20.4624.3498.88267reverse complement
CNT30118993Vitis viniferaCitrus clementina20.9277.5695.24273reverse complement
CNT3038287Vitis viniferaCucumis melo91.1979.3998.571190forward
CNT30331625Vitis viniferaDioscorea rotundata17.9373.5897.01234reverse complement
CNT30151167Vitis viniferaBrachypodium distachyon9.1220.3898.32119forward
CNT3099709Vitis viniferaOryza rufipogon28.4317.0499.73371reverse complement
CNT3039925Vitis viniferaMarchantia polymorpha25.0665.9395.72327reverse complement

Expression of CNT30571801

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MADFRLCSTSRSHSQAGLYHYAHEQNLSLSLPSHTSVTL*

>peptide 2 (64 aa)
MCRFPNQKIGEHPFSRSYGVILPSSFDMVLSSALVYSTCSPVSVWGTVSSPGGSPSQFEVFSWKF

Sequence

>CNT30571801
AGGGGGCGGCAACTAAAGAGGTAGCGAGACTGACCGCAATTGCAGGAATAGGTTGACTTTCTTTCATTTTGGTTATGGAAAGTGAAAGTAGTTTCGTTTA
GTACGAGATCGCTTCACACCTCGCGGTGCTTACACCTCTCGCCTATCGAAGTTCTGTTCAAAAACCTCGTCCGAGAACTTGTATAGAGAAGGATTTCCCG
CGGCGCAGCAGTTCTTCCATACCAACTTAGCTGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTA
GGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGC
GAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCGAGGTGCCAAACGACTCCGTCGATAAGAGCTCTTGGGAGTCATCA
GCCTGTTATCCCCGGCGTACCTTTGATCCGTTGAGCGAGAGCCCTTCCACACGGGACTCCCGGATCACTATGGCCGACTTTCGTCTCTGTTCGACCAGTC
GGTCTCACAGTCAGGCAGGCTTATACCATTACGCTCACGAGCAGAATCTTAGCTTGAGCCTACCTTCGCACACCTCCGTTACTCTTTAGGAGGCATCCTT
AGACGAAAGAGTGGTCTTTCAGGATTGGTCGTTGTGTGTCACCACCTCCCACCTATCCTACACATTCGATCAAGGTTGTCACTGCGAAGCTATAGTTAAG
GTGCACGGGGTCTTACCGTCTAGCCGTTGGTACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCAGTCGTTACAC
CATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGACAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCTTATA
ACACTTCTCCTTCCGACCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCACTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTAC
CCCCTGGTATGTGCCGCTTTCCTAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTC
AAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTACGGTCAGTTCACCGGGAGGATCGCCCTCCCAATTCGAAGTTTTTTCCTGGAAG
TTTCA