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Detailed information on CNT3057113


BLAST search results

BLAST vs Swiss-Prot:
sp|Q70XY2|CLPP_AMBTC, E-value = 2e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30268958Amborella trichopodaChenopodium quinoa8.7433.8785.66251forward
CNT30401817Amborella trichopodaBeta vulgaris2.327.0587.8866forward
CNT30200508Amborella trichopodaPisum sativum2.6534.0888.1676forward
CNT30504398Amborella trichopodaNicotiana attenuata12.9224.4287.33371forward
CNT3045660Amborella trichopodaPrunus dulcis3.6224.8289.42104forward
CNT30588249Amborella trichopodaMusa acuminata8.8454.8682.28254forward
CNT3060029Amborella trichopodaArabidopsis lyrata9.4720.3783.09272forward
CNT30597766Amborella trichopodaFraxinus excelsior8.8452.4886.61254forward
CNT30607170Amborella trichopodaGossypium raimondii12.8150.986.68368forward
CNT30218200Amborella trichopodaKalanchoe fedtschenkoi10.6527.285.95306forward
CNT30655376Amborella trichopodaRosa chinensis12.633.5285.91362forward
CNT30204699Amborella trichopodaHelianthus annuus3.0330.6387.3687reverse complement
CNT30154187Amborella trichopodaPrunus persica8.8130.7887.35253forward
CNT30644762Amborella trichopodaCannabis sativa5.0133.6486.11144forward
CNT30150017Amborella trichopodaBrachypodium distachyon2.4733.8185.9271forward

Expression of CNT3057113

Peptides detected in this lncRNA

>peptide 1 (38 aa)
PHFRELLHLFERSTSDEILSFAYLYPDKWKPKPSLSVE*

>peptide 2 (31 aa)
MLRIIDGSINLSWAKERISRSEERTGEFHMT*

>peptide 3 (30 aa)
MDTRLLPMRNCFSSHIKIIETINSISNKGI*

>peptide 4 (29 aa)
MNRSNDELIYMHLLPMGPISPLCIDTYRV*

>peptide 5 (57 aa)
MYVGWYKLHSVINSYSWYYPSAGRVYKQLEIPGIILYTEIYHETNNLIRYLTFNLLA*

>peptide 6 (63 aa)
MSDKSHYMSTQVASSSPGLRKGTFGTPTGMKEKGVKHYNFTLMQKRKSGFIVFMILSFIIFYS*

>peptide 7 (44 aa)
PIFVSCCIYLSDPQATKFSLLPTSIPINGNQSPHFLLSSSSSKS*

>peptide 8 (45 aa)
MTKWNIPMYKLKIPMAFATMTFPTTICHPVISTRIVNKDKLTKII*

Sequence

>CNT3057113
CCCCATTTTCGTGAGTTGCTGCATTTATTTGAGCGATCCACAAGCGACGAAATTCTCTCTTTTGCCTACCTCTATCCCGATAAATGGAAACCAAAGCCCT
CACTTTCTGTTGAGTAGCAGTTCGAGTAAGTCTTGAATGGGCCCCTCGAAAGGTCAATGCAAATAAACGAATTTTTGTTCGACGTCTGCGAAGCTATATA
TCCGCGTCTAACTCTGGTAATTTAATTTGATTGAATTTCACTTTAACTTTAGATGAAGAACTAATTAATTTCTTTTCTTTCAGTCATTCTTTCCCTTCAT
CCTGATTAATGACAAAATGGAATATTCCGATGTATAAACTAAAAATTCCAATGGCTTTTGCTACTATGACTTTCCCGACCACGATTTGTCATCCAGTCAT
TTCAACTCGAATAGTAAATAAGGATAAATTAACTAAAATAATATAGTGGGTTCCTTCGTTTCTATGATTACTTCTTAAACGGTGAGGCGGAGCCCCCCTC
ATTTAATCAATGTTATTGATAACTTGTACAATTCATACCATTCGGCTCTACCCATCAACTATCCAGTAATAGGTCTTTTCACAAGAAAATCTATCCATAC
AGTGACGGCATAGGCAGTTGACCCTGTAAGTGCGCTTTTGCAACAAAACAAAAAAGAGCATAATCTTTCTTCTTTTTTGAATACCATTTCCCCCGCTTAA
TGGATACCCGTTTGCTACCGATGAGGAATTGCTTTTCATCTCACATCAAGATTATAGAAACCATAAATTCCATAAGTAATAAGGGTATATGATAGATCTT
TTTAGATAGTGAATGGAATTCTTCTATTCTATTCATTGCTACTGGAAAAATCATCTAGTTTATTCTAGCTCATGATCTGAACGAGTCTCACATACACCCT
AATATATGTTTCTCGGAGGAGTAAAAAATACTATGATGGTTCGGTTGCTTTTGAAGTTTTCGTTCAACTATCCCAAAGTTTCTTTCTGATCCGATCAAAT
AAAAAAAAAGATAAAAATAATAATTTTTCTTTCATTTTATCCCTCTTTTCTTTCATAAATATACGAAAGAGACTTCGGGTGTAGGAGCAAAAAGGTTTGT
GACGCTGAAATGTACCCCCGATACATAAGATCAAATCGGGAATAACTTTTTTTCATACTACTATTTCAATACATAATCATGTTATAAAAAAAACAACGAG
GGTTTGTTCATATCGAATTAGAATTGTCATGCTATTATTACTTCTTTCTTCTTTATCTTCTTTAATATTAATATTCTATGTTTTATATTAGATTTTATTT
CTATTTCTTTTAGAATTTTATATTCATTTGTGATTGATTTTTTATTTTTTTTTTCATGTTTCATAAGGCGAAGGCATAGTTTTTTTTTTCTACTAAATAT
AAATAATATAAATAAAAACTCATTGGCGCCAAGCGTGAGGGAATGCTAGACGTTTGGTAATTTCTCATCCGGCCAAGACTAAAGATCCCATTGAAGTAGC
TAATCCCATGCATATCGTATGTACGTTGGGTGGTACAAATTGCATAGCGTCATAAATAGCTATTCCTGGTATTACCCATCCGCTGGGAGAGTTTATAAGC
AACTAGAGATCCCTGGTATCATCCTCTATACTGAGATATACCATGAGACCAACAATTTGATTCGATATCTCACCTTCAACCTCTTGGCCTAAAAAAAAGT
AATCTTTCTCGATGAAGTCGGTTGATTAGGATCAAATTGTATACCTTAGGAATCGTACACGCACCTTATGATGCATACGGTTCAAAAAATTGCGGAGAAA
ATAAAAAGAATCAATGTGCTGATTACAGACCTATTCCTTTTTTTGTAGCAGGGTTTTCCTCCCGAAGGGGCTTTTTCTTCCTTGTTCAAGAAACATGAGT
TTTGGTTCACCCCCTAAAAAAAACGATTTCACTGAACTTATTGAATCACTCTCTTACTGATGTATTCTTTTATCGAGATCAAAATCAGGGTGTAATTTTC
TTGTTCCTGAATGGGCCTCTTCAATTATTTTCTTTTAGGTTTATGCTCTACTCCGGGTAAATATATGCCCGAATTCTATTTGCACATATAGGACAAACGA
TCCTATTACCACCTCTTTTATTAGTAAGAATTAGATTTTATTAGTATTAGATTCAACTTTTTTTTTTTCAATTTGCTTCATGTCTTCCACCAAATATTTG
ATGTATTTATGCTATTACTCGATAAGTTGGAAGTTTGGGATCACTGATCGATATGGATAGTAATAATTTATGATTATGATGTACATATATTACTACTACC
AAATGCCAATTTGATATTTTCTGAACGAAGCCTGGATAGGCTACTCTATTTTATTGGTCCAAGCCAACCATAGATTATTCTAATTGATAATATCTATCCC
CAAAACAAAAGGATTAATTGCACTTAATGCTCCGAATTATTGATGGTTCAATCAATCTTTCTTGGGCGAAAGAGAGGATATCTCGATCAGAGGAGAGAAC
GGGGGAATTCCATATGACCTAATATGTCAGACAAGTCGCACTATATGTCAACCCAAGTTGCGTCTTCCTCTCCAGGACTCCGAAAAGGTACTTTTGGAAC
ACCAACGGGCATGAAGGAAAAAGGAGTTAAGCACTATAATTTCACTTTGATGCAAAAACGTAAGAGTGGGTTTATTGTCTTCATGATATTGTCATTTATC
ATATTTTATTCATAAATTGAAAGGTTCGTAGAGGAATTTGGAATGAAGAAGATTCTTAATGGATCTTACAGATGAATCGTTCGAATGATGAACTAATATA
CATGCATTTGCTTCCAATGGGACCAATCTCCCCATTGTGTATTGATACTTATCGAGTATAGAATAGATCTGC