Detailed information on CNT30570759


BLAST search results

BLAST vs Swiss-Prot:
sp|A7NVX9|METK2_VITVI, E-value = 7e-119

BLAST vs NONCODE:
NONTPRT001916, E-value = 3e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515028Vitis viniferaJuglans regia44.1329.2184.68248forward
CNT30373104Vitis viniferaArabidopsis thaliana33.4522.4183.51188forward
CNT30266730Vitis viniferaChenopodium quinoa37.3718.7584.76210forward
CNT30381524Vitis viniferaManihot esculenta45.230.7186.61254forward
CNT30712486Vitis viniferaGlycine max41.8129.3485.96235forward
CNT30441436Vitis viniferaAegilops tauschii25.9828.886.3146forward
CNT3013982Vitis viniferaZea mays44.1385.5286.69248forward
CNT3066706Vitis viniferaLeersia perrieri22.7837.6586.72128forward
CNT30626924Vitis viniferaDaucus carota94.8442.2783.86533forward
CNT30367875Vitis viniferaSorghum bicolor35.5924.1888200forward
CNT3055164Vitis viniferaAmborella trichopoda43.0621.0484.3242forward
CNT30113329Vitis viniferaFicus carica40.7521.2684.72229forward

Expression of CNT30570759

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MLFEISCNLVIGDSLVVLGGNEDSVYADWNPGTTIIVVFDSYLGFTIRPQPWAGAI

>peptide 2 (89 aa)
MHLLASPPITKRPDGLRWKMVFSSRYFSGITGLMTCSLRSAAISSLVTVSSCWVEMRTVCTRIGTLAPPSLWYSTVTWVLPSGLNHGQVP

Sequence

>CNT30570759
GTCCCAGTAACTGAGATTACGCTTGCGTCTTCTCCCACTTGAGGGGCTTTACCACCTCCCATGTGAAATCAGGGTCATCTCTGCCAAAGTGCCCATAAGC
AGCAGTCTTCAAGAACCTGCCATTGCCACCCCTCTTGAGGTCAAGGTTGATGGAAATCATCCCGGGCCTGAAATCAAAGTTCTCCTTCACAATCTTGAGT
ATCTCCCTGTCGGGGATCTTTCCAGTACCATAGGTGTCCACGAAAACTGACAAGGGTTCAGGCACACCAATAGCATAAGACACCTGCACGATGCACCTCC
TAGCCAGCCCACCAATCACAAAACGGCCAGATGGGTTAAGATGGAAGATGGTCTTCTCGTCTAGGTACTTCTCAGGAATAACAGGCTTGATGACATGCTC
TTTGAGATCAGCTGCAATCTCGTCATTGGTGACAGTCTCGTCGTGCTGGGTGGAAATGAGGACAGTGTGTACGCGGATTGGAACCCTGGCACCACCATCA
TTGTGGTATTCGACAGTTACTTGGGTTTTACCATCAGGCCTCAACCATGGGCAGGTGCCATT