Detailed information on CNT30570373


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30222092Vitis viniferaHordeum vulgare48.2866.4490.31196forward
CNT30441767Vitis viniferaAegilops tauschii48.2828.5390.31196forward
CNT30628037Vitis viniferaDaucus carota48.2839.7692.86196forward
CNT30687012Vitis viniferaTriticum urartu48.2831.3690.31196forward
CNT30596128Vitis viniferaOryza meridionalis48.2821.5690.82196forward

Expression of CNT30570373

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVLFLSSMVLLRIALLKNFQNLLHCWPSGW*

>peptide 2 (40 aa)
MHENNEGLAQELLTKVLTAVGLLLVMRSLKNEAHFFEIPL*

>peptide 3 (36 aa)
MKPISLKSHYSNDIKIEIPCRYACNWWVKCHLEAGV*

Sequence

>CNT30570373
TTTTGGGTTACCTAGATTTTGGGCGTGACACAAGCCCACTTAAAATCTTTACTGAAGTATGACCGGCCATCATATTAGCAAATAAATGCATTCCTAAGTT
TAATGCATGAAAACAATGAGGGATTAGCTCAAGAACTACTAACAAAGGTGCTAACGGCAGTGGGACTCCTGCTGGTAATGAGAAGCTTAAAAAATGAAGC
CCATTTCTTTGAAATCCCACTATAGTAATGACATAAAAATAGAAATCCCTTGTCGCTATGCTTGTAACTGGTGGGTTAAGTGCCATTTAGAAGCAGGGGT
GTAGCTTCATGGTCCTTTTTCTTTCTTCCATGGTCCTCCTGAGGATTGCACTGTTGAAGAATTTCCAAAACCTCCTTCATTGTTGGCCTAGTGGATGGTA
ATGTGG