Detailed information on CNT30570192


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381205Vitis viniferaManihot esculenta50.2354.6481.65218forward
CNT30710677Vitis viniferaGlycine max48.6246.4883.89211forward
CNT30223084Vitis viniferaHordeum vulgare21.211.7984.7892forward
CNT30237226Vitis viniferaBrassica oleracea20.7419.8783.3390forward
CNT3068331Vitis viniferaLeersia perrieri22.8112.9182.8399forward

Expression of CNT30570192

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MTRAMGWGLGSLRSGSGWLQLQTAHQTRTAP

Sequence

>CNT30570192
AAATATTCATTGTTCATGAGACTTCTCATGAATTGAAGTTCTAGCAAATAGATTTACGGATTGTTTGACCATTTTCTTATCTGTAGGACAACATCGGAGT
AAACATTATGCATTTGTGGTGATTTCAGGCTTTAACACATCGAGAGAGAAATGCATATTCAGCACTCCATTGTCTTCCTTTCAATCTGATTTTTTTTGCA
AGTGCAGCAGCTTAGTAGACGTAGCCCTTGACGAACATTCCCTTCTTTGCCTCCTCTGACTCTCCTTCGCCAGTGTACTTCCCGAGCTGAGCAAGAGAGT
TGGCCTTGGCAAGTGTTCTGGAGGGCCCTGGCATACGAGAATGACACGTGCCATGGGTTGGGGCCTTGGTTCATTGCGTTCAGGTTCAGGGTGGCTTCAA
CTTCAGACTGCCCACCAGACAAGAACTGCTCCAC