Detailed information on CNT30570130


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FK62|SAU24_ARATH, E-value = 3e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3071844Vitis viniferaQuercus suber42.072281.54130forward
CNT30198235Vitis viniferaPisum sativum33.6611.9881.73104forward
CNT3044394Vitis viniferaPrunus dulcis46.617.7381.94144forward
CNT30560986Vitis viniferaActinidia chinensis34.6318.882.24107forward
CNT3089317Vitis viniferaVigna radiata31.3912.7383.5197forward
CNT30171686Vitis viniferaTrifolium pratense24.610.1184.2176forward
CNT30655496Vitis viniferaRosa chinensis37.8640.6284.62117forward
CNT30623724Vitis viniferaDaucus carota27.8318.8283.7286forward
CNT30410040Vitis viniferaPapaver somniferum40.4529.8381.6125forward
CNT30644712Vitis viniferaCannabis sativa28.823.883.1589forward

Expression of CNT30570130

Peptides detected in this lncRNA

>peptide 1 (43 aa)
WVEMKQSSPLNSKLEGLLYKLQVNVLEVTHPIHYNVTLSLLLL*

Sequence

>CNT30570130
TGGGTGGAAATGAAACAGTCCAGTCCCCTTAATTCAAAACTGGAGGGACTGCTTTACAAATTACAAGTCAATGTGTTAGAGGTTACTCATCCTATACACT
ACAATGTGACTCTCTCTCTTCTCCTCTTATGAGCTGTTCAAACCACTGGTAACATCAATGAAGGCCTCTTCTGTGCATGGGATTGTGAGACCTCCCATTG
GATGATTGAACCCGAACTCTTCTTCAGCCTGACTCAACAAGTTCTGGAATGAAGGGTTCTTCAAGTATGAGATTGGAACCACAAACCTCTTCTTCTGGGC
TTCTCCCAC