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Detailed information on CNT30569653


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Actinidia chinensisOryza sativa47.0910.0996.84316forward
CNT30678576Actinidia chinensisSetaria viridis47.0962.4593.99316forward
CNT30521002Actinidia chinensisSetaria italica18.0326.8398.35121reverse complement
CNT30304298Actinidia chinensisTriticum aestivum47.0911.9496.84316forward
CNT30400948Actinidia chinensisTriticum turgidum47.0912.6496.52316forward
CNT30585815Actinidia chinensisMusa acuminata47.0913.0294.94316reverse complement
CNT30147394Actinidia chinensisMedicago truncatula47.0915.8695.89316reverse complement
CNT30440683Actinidia chinensisAegilops tauschii47.0932.7196.84316reverse complement
CNT30247816Actinidia chinensisAvena sativa47.0915.1396.84316reverse complement
CNT30662061Actinidia chinensisTriticum dicoccoides47.0916.4796.84316forward
CNT3081478Actinidia chinensisBrassica juncea47.0927.2992.72316reverse complement
CNT30460491Actinidia chinensisSaccharum spontaneum7.324.2693.8849reverse complement
CNT30143344Actinidia chinensisLolium perenne47.0914.1396.84316forward
CNT3017904Actinidia chinensisZea mays49.1820.0592.73330forward
CNT30229838Actinidia chinensisAnanas comosus21.0131.8395.04141forward
CNT30218527Actinidia chinensisKalanchoe fedtschenkoi40.0918.0797.03269forward
CNT3067373Actinidia chinensisLeersia perrieri29.0664.5794.87195reverse complement
CNT30689128Actinidia chinensisTriticum urartu47.091796.84316reverse complement
CNT30595506Actinidia chinensisOryza meridionalis40.5424.7397.43272forward
CNT30369805Actinidia chinensisOryza glumipatula47.0922.0495.57316reverse complement
CNT30420891Actinidia chinensisPapaver somniferum46.0511.589.97309forward
CNT30318721Actinidia chinensisAsparagus officinalis11.1830.248875reverse complement
CNT30104648Actinidia chinensisOryza rufipogon39.4945.4596.6265forward
CNT30575706Actinidia chinensisOryza barthii47.0912.9794.62316reverse complement
CNT30582488Actinidia chinensisEchinochloa crusgalli47.0926.0396.84316reverse complement
CNT30495774Actinidia chinensisDigitaria exilis33.9857.5898.68228forward
CNT30116696Actinidia chinensisOryza nivara47.097.9796.84316forward

Expression of CNT30569653

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MLSHPSVGRDPESCLRIWPSFVDMRISPLHTK*

>peptide 2 (33 aa)
PLRTTPPGGSPECRVFLRRQLDVVVTCKSWPKT*

>peptide 3 (35 aa)
MPSLSPPPTRRRRHLQELAKNLTLLNKREKPFLSY*

>peptide 4 (48 aa)
MQHLYESQYHPVKDRFSCSYAPPLVQAPVNSFEFRSCDRTPQAECFTR*

>peptide 5 (64 aa)
THYVPHHRAARLNAESFSAANSTSSSPARVGQKLDFTKQARKALSILLVKRASCKKTKAHRRKG*

>peptide 6 (81 aa)
MKVSTIPLRTGFLVHMLHRLCRPPSIPLSFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLIPFAPHAFAPQRR*

Sequence

>CNT30569653
ACCCACTACGTACCACACCACCGGGCGGCTCGCCTGAATGCCGAGTCTTTCTCCGCCGCCAACTCGACGTCGTCGTCACCTGCAAGAGTTGGCCAAAAAC
TTGACTTTACTAAACAAGCGAGAAAAGCCCTTTCTATCTTATTAGTAAAGCGCGCTAGCTGCAAGAAAACTAAAGCGCACAGACGAAAGGGCTGACAAAG
ACTTTCTCCTTAGGCGCATGTCTCAGCAACACAAAACGAGGGTTTCGCTCGTTATAGGACTTAACCAAACATCTCACGACACGAGCTGACGACAGCCATG
CAGCACCTGTATGAAAGTCAGTACCATCCCGTTAAGGACAGGTTTTCTTGTTCATATGCTCCACCGCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTC
GGTCTTGCGACCGTACTCCCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGAC
TACCGGGGTATCTAATCCCGTTCGCTCCCCATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCATTTGGCCTTCCTTCGTAGATA
TGAGGATTTCACCCCTACACACGAAATGAAACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCA