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Detailed information on CNT30569652


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548816Actinidia chinensisIpomoea triloba53.1931.0898.11317forward
CNT30378671Actinidia chinensisArabidopsis thaliana25.3453.5597.35151forward
CNT30632593Actinidia chinensisVigna unguiculata53.1918.7897.16317reverse complement
CNT30635645Actinidia chinensisCapsicum annuum49.6647.8295.27296reverse complement
CNT3093840Actinidia chinensisSolanum tuberosum47.1545.6296.44281forward
CNT30307589Actinidia chinensisTriticum aestivum36.0754.0298.6215reverse complement
CNT30220645Actinidia chinensisHordeum vulgare45.359.7393.7270forward
CNT30554921Actinidia chinensisOryza glaberrima23.1539.0997.83138reverse complement
CNT30655385Actinidia chinensisRosa chinensis53.1913.4698.11317reverse complement
CNT30203595Actinidia chinensisHelianthus annuus53.1917.395.9317reverse complement
CNT30366518Actinidia chinensisSorghum bicolor12.5823.158875forward
CNT30323793Actinidia chinensisAsparagus officinalis28.1953.1695.83168reverse complement
CNT30151602Actinidia chinensisBrachypodium distachyon44.4652.8990.94265forward
CNT30726123Actinidia chinensisLupinus angustifolius22.994.1397.81137reverse complement

Expression of CNT30569652

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MPSLSPPPTRRRRHLQELAPAPFLLTAQRSAGTQLVALARHSAPRLTSVAKTFSLGACLSNTKRGFRSL*

Sequence

>CNT30569652
GATTCGCTCCGCCTTACAGCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCA
CCTTCCTCCAGTATATCACTGGCAGTCCTTCGTGAGTGCGGCACGCACCTTTGAGTTTGTTTCGGAGCCGTTTTGGCGGAGCGTACTAAACCCACTACGT
ACCACACCACCGGGCGGCTCGCCTGAATGCCGAGTCTTTCTCCGCCGCCAACTCGACGTCGTCGTCACCTGCAAGAGTTGGCGCCGGCTCCCTTCTTACT
GACAGCACAGCGTAGTGCTGGCACTCAATTAGTAGCGCTGGCACGTCACTCGGCTCCTCGGCTCACTTCGGTTGCAAAGACTTTCTCCTTAGGCGCATGT
CTCAGCAACACAAAACGAGGGTTTCGCTCGTTATAGGACTTAACCAAACATCTCACGACACGAGCTGACGACAGCCATGCAGCACCTGTATGAAAGTCAG
TACCATCCCGTTAAGGACAGGTTTTCTTGTTCATATGTCAAGGGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGCTTG