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Detailed information on CNT30568730


BLAST search results

BLAST vs Swiss-Prot:
sp|P25698|EF1A_SOYBN, E-value = 3e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3052962Actinidia chinensisAmborella trichopoda28.2815.3889.6125forward

Expression of CNT30568730

Peptides detected in this lncRNA

>peptide 1 (98 aa)
GWFMIITWEVKLAASLAGSSLEFEATNPRLRSLTATFFTLNPTLSPGKASWRASCANSTNLVDILKWEAKRLVRGPLRFTNHVKGVKQGWALVPVKVG*

>peptide 2 (39 aa)
MSRASSRVGPLYQSRLVDLSIMLSPSNPEIGTKGILSGL*

Sequence

>CNT30568730
GGATGGTTCATGATAATAACCTGGGAAGTGAAGTTGGCAGCTTCCTTGGCAGGATCATCCTTGGAATTTGAGGCAACAAACCCACGCTTGAGATCTTTGA
CAGCAACATTCTTCACGTTAAACCCAACATTGTCGCCTGGCAAGGCCTCTTGGAGAGCCTCGTGTGCCAATTCCACCAATCTTGTAGACATCCTGAAGTG
GGAGGCGAAGAGGCTTGTCCGAGGGCCTCTTAGGTTCACTAATCATGTCAAGGGCGTCAAGCAGGGTTGGGCCCTTGTACCAGTCAAGGTTGGTTGACCT
CTCAATCATGTTGTCACCCTCGAACCCAGAAATTGGGACAAAGGGGATCTTATCAGGGTTGTAGCCCACCTTCTTGAGATATGAGGAGACTTCCTTAACA
ATTTCATCATACCTTGCCTTTGAATATTTTGGGGTAGTTGCG