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Detailed information on CNT30568726


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3050869Actinidia chinensisCucumis sativus95.0289.9184.43668forward

Expression of CNT30568726

Peptides detected in this lncRNA

>peptide 1 (95 aa)
PNKNQKPSEIATAETKNKVEGGLLLDVVIRKRPPILKLLPGKDQPLLVRRNPLLVLNLSLHIINRVQALHLQRYCLPRQRLNKYLHPAPQPQHQM*

>peptide 2 (58 aa)
TQQEPKAFRNRHRGDEEQGGGWTPSGCCNPQASAHPQAASRQRSASAGPEESPPCPES*

>peptide 3 (30 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVF

Sequence

>CNT30568726
ACCCAACAAGAACCAAAAGCCTTCAGAAATCGCCACCGCGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGCGTCCG
CCCATCCTCAAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCC
AAGCTCTCCACCTCCAGCGTTATTGTCTTCCCCGTCAGCGTCTTAACAAATATCTGCATCCCGCCCCTCAGCCGCAGCACCAAATGTAGGGTTGACTCCT
TCTGGATGTTGTAGTCTGCCAGAGTCCGCCCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGGAT
CTTCGCCTTCACGTTATCAATTGTGTCGGAGCTCTCAACCTCGAGCGTGATTGTTTTCCCAGTTAGGGTTTTTACGAAGATCTGCATGCCACCGCGGAGG
CGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCCGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGAT
CCGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTT
CAC