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Detailed information on CNT30568725


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Actinidia chinensisNymphaea colorata95.655.5383.231109forward
CNT30615967Actinidia chinensisSesamum indicum95.632.9880.71109forward
CNT30279009Actinidia chinensisChenopodium quinoa89.9168.2681.981043forward
CNT3019984Actinidia chinensisCitrullus lanatus78.5360.0582.22911forward
CNT30727322Actinidia chinensisCorchorus capsularis78.5371.6882.44911forward
CNT30169882Actinidia chinensisPistacia vera96.954.4883.811124forward
CNT30637410Actinidia chinensisCapsicum annuum96.7264.4881.191122forward
CNT3096745Actinidia chinensisSolanum tuberosum94.5773.4381.131097forward
CNT30538027Actinidia chinensisBrassica napus97.1659.4481.631127forward
CNT30511508Actinidia chinensisSolanum lycopersicum94.0583.4181.211091forward
CNT30608559Actinidia chinensisGossypium raimondii96.973.6681.491124forward
CNT30229013Actinidia chinensisAnanas comosus97.1671.4682.171127forward
CNT30217449Actinidia chinensisKalanchoe fedtschenkoi93.7972.182.351088forward
CNT30624049Actinidia chinensisDaucus carota98.155.2482.511138forward
CNT30355893Actinidia chinensisLactuca sativa97.1667.9781.91127forward
CNT3032754Actinidia chinensisTheobroma cacao95.0984.0780.61103forward
CNT30324534Actinidia chinensisAsparagus officinalis90.682.1782.211051forward
CNT30120587Actinidia chinensisCitrus clementina97.3384.7681.41129forward
CNT30330418Actinidia chinensisDioscorea rotundata75.9587.9282.18881forward
CNT30595410Actinidia chinensisEragrostis curvula96.3881.9681.571118forward
CNT30174676Actinidia chinensisVigna angularis74.5780.7783.7865forward
CNT30111644Actinidia chinensisFicus carica95.6977.8981.351110forward
CNT30334108Actinidia chinensisCynara cardunculus93.7946.7281.251088forward
CNT30726149Actinidia chinensisLupinus angustifolius76.9846.981.86893forward
CNT3050995Actinidia chinensisCucumis sativus92.6796.5983.261075forward

Expression of CNT30568725

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVF

>peptide 2 (95 aa)
PNKNQKPSEIATAETKNKVEGGLLLDVVIRKRPPILKLLPGKDQPLLVRRNPLLVLNLSLHIINRVQALHLQRYCLPRQRLNKYLHPAPQPQHQM*

>peptide 3 (58 aa)
TQQEPKAFRNRHRGDEEQGGGWTPSGCCNPQASAHPQAASRQRSASAGPEESPPCPES*

Sequence

>CNT30568725
CACCCAACAAGAACCAAAAGCCTTCAGAAATCGCCACCGCGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGCGTCC
GCCCATCCTCAAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTC
CAAGCTCTCCACCTCCAGCGTTATTGTCTTCCCCGTCAGCGTCTTAACAAATATCTGCATCCCGCCCCTCAGCCGCAGCACCAAATGTAGGGTTGACTCC
TTCTGGATGTTGTAGTCTGCCAGAGTCCGCCCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCCGGTGGAATCCCCTCTTTATCCTGAA
TCTTTGCCTTCACGTTATCAATCGTATCAGAGCTCTCAACCTCGAGCGTGATTGTCTTGCCGGTTAGGGTTTTGACAAAGATTTGCATTCCTCCACGGAG
GCGGAGCACAAGGTGGAGTGTTGATTCCTTCTGGATGTTGTAATCGGCAAGAGTACGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGACGCTGTTGA
TCCGGAGGAATACCTTCCTTGTCTTGGATCTTCGCTTTCACATTATCAATTGTATCAGAGCTCTCAACCTCAAGAGTGATTGTCTTTCCAGTTAGGGTCT
TTACAAAGATCTGCATTCCTCCACGGAGGCGGAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCCGCAAGAGTACGGCCGTCCTCGAGCTG
TTTTCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGAATACCTTCCTTGTCTTGAATTTTGGCCTTGACATTATCAATTGTATCTGAGCTCTCGACCTCG
AGCGTGATTGTCTTGCCAGTTAGGGTTTTTACGAAGATCTGCATGCCGCCGCGGAGTCGGAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGT
CCGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGATCCGGAGGAATGCCTTCTTTGTCCTGGATTTTGGCTTTGACGTT
GTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTCAC