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Detailed information on CNT30568721


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 8e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381863Actinidia chinensisManihot esculenta51.0373.2882.71694forward
CNT30630785Actinidia chinensisVigna unguiculata49.4978.984.55673forward
CNT30506305Actinidia chinensisNicotiana attenuata50.7473.1783.77690forward
CNT30157672Actinidia chinensisPistacia vera51.0366.8685.01694forward
CNT30128346Actinidia chinensisCorymbia citriodora51.2575.0384.94697forward
CNT30153579Actinidia chinensisPrunus persica50.1543.0683.43682forward
CNT30120657Actinidia chinensisCitrus clementina50.2268.3784.63683forward

Expression of CNT30568721

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNKFNKFNIQNPKIITNIHRLIQKTGVEKMYKSNKFNIQK*

>peptide 2 (58 aa)
KTENRNKHKTANIRNTTRCLYLSNITSETKHPTRTKSLQKSPPRRRRTRWRVDSFWML*

>peptide 3 (40 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICICKSQ*

Sequence

>CNT30568721
AAAAAACTGAAAACAGAAACAAACATAAAACAGCAAACATAAGAAACACTACTAGATGTCTTTACTTAAGCAACATCACTTCAGAAACTAAGCACCCAAC
AAGAACCAAAAGCCTTCAGAAATCGCCACCGCGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCCGCAAGCGTCCGCCCATCC
TCAAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCCTTCACATTATCAATCGTGTCCAAGCTCT
CCACCTCCAGCGTTATTGTCTTCCCCGTCAGCGTCTTAACAAATATCTGCATCCCGCCCCTCAGCCGCAGCACCAAATGTAGGGTTGACTCCTTCTGGAT
GTTGTAGTCTGCCAGAGTCCGCCCATCCTCCAATTGCTTCCCTGCGAAGATCAGCCTCTGTTGATCCGGAGGAATACCTTCCTTGTCTTGGATCTTCGCC
TTCACGTTATCAATTGTGTCGGAGCTCTCAACCTCGAGCGTGATTGTTTTCCCAGTTAGGGTTTTTACGAAGATCTGCATGCCACCGCGGAGTCGGAGCA
CGAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCCGCAAGAGTGCGGCCATCCTCGAGCTGTTTTCCTGCGAAGATCAGACGCTGCTGATCCGGAGG
AATGCCTTCTTTGTCCTGGATTTTGGCTTTGACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCGGTTAGGGTTTTCACGAAG
ATCTGCATCTGTAAATCGCAATAACAAAAATCAGATACAGTGATTGGTGATTCAATTAAGCCAATATTCAAAGACACGAAATGATAGCAGATTCACAAAA
TAATGAAAGATCTTCAGAATAACAAATTCAGAAAACTGGATCCGAGAGTATGACTAAATTCAATTAATTCAATATGCAAAAATGTAAAATAATAGCAGAT
CTCAATACTATCAGAACTTGAGAGATTAATACAGGAAACTGGAGTCGAGAAGATGAATAAATTCAATAAATTCAACATACAGAACCCCAAAATAATCACC
AATATTCATAGATTAATTCAGAAAACTGGAGTCGAGAAGATGTATAAATCCAATAAATTCAACATACAGAAGTAACAGAACCACAAAATAATCAACACAA
AGCAAATTCAACATACAGAAACACAAAATAATCACAGGTCTTCAGAATAACAAATTCAGAAAACTGGATTGGAGATGATGACTAAATTCAATTAATTCAA
TATGCAAAAACACAAAATAATAGCAGATCTTCAGAGATTAATACAGGAAACTGGAGTCGA