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Detailed information on CNT30568707


BLAST search results

BLAST vs Swiss-Prot:
sp|P45726|PALY_CAMSI, E-value = 4e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727763Actinidia chinensisCorchorus capsularis36.8124.2281.44194forward
CNT3023983Actinidia chinensisPopulus trichocarpa21.8211.1281.74115forward

Expression of CNT30568707

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGRLRCRGHRCMQTRIRGPLLSTSPSQKTLKGEVLH*

>peptide 2 (47 aa)
NIVNFDLTEGKRSTIPLLETIHQWINHLPLAHRGEHLVELLPRLYNG*

Sequence

>CNT30568707
AACATAGTAAATTTTGACTTAACAGAGGGGAAGAGGAGCACCATTCCACTCCTTGAGACAATCCATCAGTGGATCAATCATCTTCCCCTCGCACATCGCG
GTGAACACCTTGTCGAACTCCTCCCCCGCTTGTACAATGGATAAGATCGGCACTCCTTAATCCGGTTTGCAATAGTCGGATTCCCACTCTCCACCGCTGC
CCTAGCACTCTCCACCTCCTTGGGCAAAACCGCCTTTAGCTCCTCCTCGAAAGCCCAAATCTTTTGGAAGATTGAAGTGCTTAAATTCTTCTCACCGTCG
CCATTTTTCAAGGCGTGGTCGACTAGGACTTGCCTCAATTTTTGCATCAATGGGTAGGTTGCGCTGCAGGGGTCATCGATGTATGCAAACACGTATTCGC
GGTCCACTACTCTCAACAAGTCCTTCTCAGAAAACCTTGAAGGGTGAAGTTCTCCATTAACGCCCATGGTTAGGACGCGCTTGGCTACTTGGCTCACGGT
GCTCTTGACGGCATTCTTCAAGTTCTC