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Detailed information on CNT30568309


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615812Actinidia chinensisSesamum indicum13.6566.282.98141forward
CNT30120547Actinidia chinensisCitrus clementina5.4222.0589.2956forward

Expression of CNT30568309

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVVVCVPLFTHFLRHDLSFSLSLEYFNDSLSLSLSLSLSVF

>peptide 2 (56 aa)
MTEKSLKTETTKNKSSNHLQNMREIFKWFCFILNPNTAFVLGGVWEIFLPEIPAVQ*

Sequence

>CNT30568309
CACCGAGTTCGACCCACCACCCAGCGAGTTGTAGTAGCTTTTCATGAAGGCCTTCACCAACCCAACCCCTGAAATGGCACCCAAACACTGCGCGACCATG
TAAGACACCGCCCTGATTAGCGACACCTTCCGAGCCAGGAACAGCCCGAACGTCACCGCCGGGTTTATGTGACCACCTGCCAAAAACAAATAAGAAAAAA
AAAGAGAGAGAGAAACTATGAAATTTGTTTGGGGAACCTAACAAAAAATTTAACTAATTTATCGATAATTAAAAATAACTATAAAATTTTGTTGATACAG
TAAATTTTTTTAAAAAAATTTAAAAAATAGCTAAGAAATTTCAAACAAAAAGCTAAAACTGTCAATTTATTTGAGCTCTTCGTTAAAAAGAAAGGGAAAA
AAAACAAACCCAATTATCCTATTGTTTTTGGCTTTTATTTGTCTGTTTTCAGTGAGTTTTAAACTTTTCAGCCATATAGTTCCCCCAAATTTCGTTTATT
TTTCTCCACTTTTTTCATTCATCCAATCAACACCAAAAAAACTGAAAATCTATGACTGAAAAGTCACTGAAAACAGAAACTACTAAAAACAAAAGCTCCA
ATCATTTGCAAAACATGAGAGAGATTTTTAAATGGTTTTGCTTCATCCTTAATCCGAACACAGCCTTCGTGTTAGGGGGTGTTTGGGAGATTTTCTTACC
AGAGATTCCGGCGGTGCAGTAGACAAGGATGAAGATCATGCCGCCGAAGGCCCAGTTTGCTTCTTGTGGCCGATGACGGTGGCGACCGTCACGTACAAGA
AGAGTAGGGTGGCTACGAACTCTGCGATCAGAGCCCTGTAGAAGGACCACTTCTTCAGCTCCGCCATGTCCATCAGCGGCGCCGGCGGTGGGTCCACGTA
GTCCTTCCCATGGTGGTGGTGTGCGTGCCCCTCTTCACTCACTTCCTTCGACATGATCTCTCTTTCTCTCTCTCTCTAGAATACTTCAATGACTCACTCT
CACTCTCTCTCTCTCTCTCTCTCTCTGTGTTTT