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Detailed information on CNT30568278


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671777Actinidia chinensisSetaria viridis16.8431.3287.9583forward
CNT30535437Actinidia chinensisEucalyptus grandis19.8827.4587.7698forward
CNT30632211Actinidia chinensisVigna unguiculata22.7236.8482.14112forward
CNT30710681Actinidia chinensisGlycine max22.7215.4781.25112forward
CNT30586754Actinidia chinensisMusa acuminata18.6634.0788.0492forward
CNT3085023Actinidia chinensisVigna radiata25.9626.4589.06128forward
CNT30552571Actinidia chinensisOryza glaberrima13.3926.0990.9166forward
CNT30435838Actinidia chinensisAegilops tauschii14.228.1192.8670forward
CNT30254684Actinidia chinensisAvena sativa17.8539.1187.588forward
CNT3079298Actinidia chinensisBrassica juncea23.5327.2987.07116forward
CNT30653715Actinidia chinensisRosa chinensis35.2929.8587.93174forward
CNT30214941Actinidia chinensisHelianthus annuus19.0736.8689.3694forward
CNT30680173Actinidia chinensisTriticum urartu14.228.8192.8670forward
CNT30346584Actinidia chinensisEragrostis tef21.713.3385.05107forward
CNT30101140Actinidia chinensisOryza rufipogon15.2128.6390.6775forward

Expression of CNT30568278

Peptides detected in this lncRNA

>peptide 1 (98 aa)
RDVRVTRAPLGVSGGENCVDEDESADDLGAESSAGVVASSDGVGTAAERIVVAFHEGLHQPNPTNRPQTLRYHVSHRSNQRCQGGRRRRRGRTVSCGR*

Sequence

>CNT30568278
CCGGGACGTGAGAGTCACGCGCGCTCCTCTTGGGGTCAGTGGCGGAGAAAACTGTGTAGACGAGGACGAAAGTGCCGATGATCTCGGCGCCGAGAGCAGT
GCCGGTGTTGTAGCCAGTAGCGACGGAGTTGGCACCGCCGCCGAGCGAATTGTAGTAGCTTTTCATGAAGGCCTTCACCAACCCAACCCCACAAATCGCC
CCCAAACACTGCGCTATCATGTAAGCCACCGCTCTAATCAGCGATGCCAAGGAGGCCGACGCCGTCGCAGGGGCCGGACTGTTTCTTGTGGCCGATGACG
GTGGCGACGGTAACGTAGAGGAAGAGTAGGGTGGCGATGAACTCCGCGATCAGGGCTCTGTAGAAGGACCACTGCTTCAGCTCCTCCGTGTCGATCAGCG
GCGCCGGTGGCGGGTCCACGTAGTCCTTCCGGCCTTGCCCCTCCTCGCTCACTACTTCCTTCGACATCTTCTCACTCTCTCTCTAGACTGCCT