Detailed information on CNT30567886


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40459|PSBO_TOBAC, E-value = 4e-144

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700663Actinidia chinensisQuercus lobata25.9471.3284.66378forward
CNT30708164Actinidia chinensisGlycine max38.0243.4980.69554forward
CNT30207216Actinidia chinensisHelianthus annuus24.0264.2280.57350forward
CNT30725886Actinidia chinensisLupinus angustifolius38.8524.7381.8566forward
CNT3051042Actinidia chinensisCucumis sativus31.584.2282.57459forward

Expression of CNT30567886

Peptides detected in this lncRNA

>peptide 1 (41 aa)
VEHTRFLGSSHPLEPLPPNQCQMAECFQKHRSPPRSQACSW*

>peptide 2 (49 aa)
LSIPDSLDLHILWNLCPQISVRWLNAFKNTDHLPALRLALGDTEGDFPC*

>peptide 3 (53 aa)
MLSKTPITSPLSGLLLVTLRVIFPVDDAVFFMFSLTSSSSSPLPPAGSATALS*

>peptide 4 (29 aa)
MSCSEFHHRLAVLGLPRHLLPRLSKICRC*

>peptide 5 (30 aa)
MLYLPGLNANFSTPPSMVGHWKGTRSPPGN*

>peptide 6 (31 aa)
MLQMERIEIPILCMLKARNALFFALMLRKKT*

>peptide 7 (35 aa)
MLYLPGLNANFSTPPSMVGHWLAVPVPFTSRYVLL*

Sequence

>CNT30567886
AGTTGAGCATACCAGATTCCTTGGATCTTCACATCCTTTGGAACCTTTGCCCCCAAATCAGTGTCAGATGGCTGAATGCTTTCAAAAACACCGATCACCT
CCCCGCTCTCAGGCTTGCTCTTGGTGACACTGAGGGTGATTTTCCCTGTTGATGATGCAGTGTTCTTTATGTTTTCCTTAACGAGCTCCTCTTCATCCCC
TCTCCCTCCTGCCGGAAGTGCAACTGCATTGTCATAACCGGTAGAGCCACCCCTTCCCTTTGGGTCCAAGAAAGACGAGCCTCTGTATGACGGCACAAGA
AACTCTCCACCGAAGCTCTCTGGTTTACCGGATGCTACCAACTGTTTGATGGTGAAGAGGAAGGGCACACGCTCACCACCAGGCAATTGAACTGTGACTG
CAGCGTAGTCAATTCCATCTTTCTCCTCGAACTTAACTGCGCCATCAGGAGAGACTTCGAAGGGTCCCTCGATTTCATCGAGGGTGTAGGTTAAACGGGT
CATAAGCTTGGTATTTTGGAACTCAGGAGGGGCATTCTTGTTCACACCCTCAGCCTTGACAGTGAATGAGGTGGGTTCCAAGCAAAATTTCTTCATGTTG
TATTTGCCTGGCTTGAATGCAAATTTTTCTACACCACCGTCAATGGTTGGGCACTGGAAGGGCACACGCTCACCACCGGGCAATTGAACTGTGACTGCAG
CGTAGTCAATTCCATCTTTCTCCTCGAACTTAACTGTGCCATCAGGAGAGACATCGAAGGGTCCCTCGATCTCATCGAGGGTGTAGGTTAAACGGGTCAT
AAGCTTGGTATTTTGGAACTCAGGAGGGGCATTCTTGTTCACACCCTCAGCCTTGACAGTGAATGAGGTGGGTTCCAAGCAAAATTTCTTCATGTTGTAT
TTGCCTGGCTTGAATGCAAATTTTTCTACACCACCGTCAATGGTTGGGCACTGGTTAGCTGTCCCAGTTCCTTTTACTTCTAGGTATGTCTTGCTCTGAA
TTTCATCATAGGTTAGCCGTTTTGGGACTCCCTCGGCACTTGCTCCCTAGATTGTCCAAGATATGCAGGTGTTAGTATCTTTTCCCACAACGATGGAAAT
GAAGAGAAAATAAACAAGTAAAATATATCACTAATCAAACCAAAACCAGAATAACCAAACCAATTTTAGGATGAAGAACGGGATTTGATAATATGTTGCA
ATCGCATACATTGAAATAGAAATCTCCATCTGATGCTACAGATGGAGAGGATTGAAATCCCCATCTTATGCATGTTGAAGGCTCGAAACGCTCTTTTCTT
CGCTTTAATGCTTAGAAAGAAAACATAACACTAAAGGAACCCGGTATATTCTACTTGCAGTAGCAGTAAAGCAGCAAGGTTTGAGTTCCACCAGTACCAG
GAATGGCATATGAGGTTTACTTGGATAAAGCAAACTCATGAACCAGATGATATTAGT