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Detailed information on CNT30567755


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2QS13|UGDH5_ORYSJ, E-value = 8e-137

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697796Actinidia chinensisOryza sativa31.9356.0580.75213forward
CNT30675579Actinidia chinensisSetaria viridis33.1337.3983.71221forward
CNT30640789Actinidia chinensisNymphaea colorata33.1327.9479.64221forward
CNT30512478Actinidia chinensisJuglans regia42.4343.5482.33283forward
CNT30698862Actinidia chinensisQuercus lobata34.1850.8980.7228forward
CNT30266319Actinidia chinensisChenopodium quinoa42.2818.3184.04282forward
CNT30629956Actinidia chinensisVigna unguiculata29.3933.6283.67196forward
CNT30712378Actinidia chinensisGlycine max16.7930.5283.04112forward
CNT30163913Actinidia chinensisPistacia vera58.1724.4579.64388forward
CNT30639121Actinidia chinensisCapsicum annuum31.0319.5582.61207forward
CNT3091994Actinidia chinensisSolanum tuberosum26.8469.1180.45179forward
CNT30137623Actinidia chinensisLolium perenne21.7418.6480145forward
CNT308677Actinidia chinensisZea mays9.4521.3688.8963forward
CNT3041515Actinidia chinensisChlamydomonas reinhardtii8.8523.9889.8359forward
CNT30569714Actinidia chinensisVitis vinifera42.7331.7782.81285forward
CNT30112276Actinidia chinensisFicus carica58.1730.3184.28388forward
CNT3049996Actinidia chinensisCucumis sativus32.2333.2381.4215forward

Expression of CNT30567755

Peptides detected in this lncRNA

>peptide 1 (83 aa)
MLNRALSPRSPLHTSMAGVSRVSPVSFLKANPKTAIFLFDTVLNMEETTRFKISFWKQEPPKPTLAFRNLDPILVSLPTAYDT*

>peptide 2 (36 aa)
MALTDEILWARKALAASLESSADHKLVHMMRSSGTQ*

>peptide 3 (85 aa)
FLHVVVYPLVIEGLELIPLSENANAMCPFCCLVGIPNHTDLLHGGGAHRLEVKRMVPVKLVHREVPLDLVLCDLRVIYAQPGLVP*

Sequence

>CNT30567755
GGTTTCTGCATGTTGTTGTATATCCTCTGGTAATCGAGGGTCTTGAACTCATCCCACTCAGTGAGAATGCAAATGCCATGTGCCCCTTTTGTTGCCTCGT
AGGCATCCCAAACCACACTGACTTGCTTCACGGTGGTGGGGCTCATCGGCTGGAGGTGAAGAGGATGGTCCCAGTCAAACTTGTTCATCGTGAGGTCCCT
CTGGATCTGGTCCTCTGTGACCTGCGGGTCATATATGCTCAACCGGGCCTTGTCCCCTAGAAGCCCTTTGCACACGTCAATGGCCGGGGTCTCACGGGTG
TCACCCGTATCCTTCTTGAAGGCAAACCCCAAAACGGCAATCTTCTTGTTTGACACCGTGTTAAACATGGAGGAAACAACACGGTTCAAGATATCCTTCT
GGAAGCAAGAGCCACCAAAACCAACACTAGCATTCAGGAACTTGGACCCGATCCTAGTGTCTTTGCCCACAGCATATGACACCTGAGTCACATCTGCTCC
GGTGGCCTCACAAAGTGCTGACATGGCATTAACGGATGAGATTCTCTGGGCCAGAAAAGCATTGGCAGCGAGCTTAGAGAGCTCTGCGGACCACAAATTG
GTGCATATGATGCGGTCGTCGGGGACCCAATGAGCATAGACCTCTTTCAGTGCTTGGATTGCCTTCT