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Detailed information on CNT30567675


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617713Actinidia chinensisSesamum indicum32.8215.1583.84297forward
CNT30632292Actinidia chinensisVigna unguiculata23.437.0782.55212forward
CNT30505351Actinidia chinensisNicotiana attenuata32.388.4386.01293forward
CNT3095993Actinidia chinensisSolanum tuberosum32.387.3283.62293forward
CNT30511193Actinidia chinensisSolanum lycopersicum32.4916.5982.65294forward
CNT30553466Actinidia chinensisOryza glaberrima12.1521.0788.18110forward
CNT30121210Actinidia chinensisCitrus clementina22.435.2189.16203forward

Expression of CNT30567675

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MLPNVKPGSNKCTSRNFPKRQNGYILFKIT*

>peptide 2 (47 aa)
PLFVFVNFVATLPLSLELRREGQKRIGMLIPHPQISPSMSFFLNENK*

Sequence

>CNT30567675
CTCCCTTGTTTGTGTTTGTTAACTTTGTTGCAACACTTCCTCTTTCCCTTGAACTAAGAAGGGAAGGACAAAAGCGAATCGGTATGCTAATTCCTCATCC
TCAAATCAGTCCTTCCATGAGTTTTTTTCTCAACGAAAACAAATAAGTAATTATAGGAGGGAAATCTTGATATAATTTGAAAAAACAAATGACAAGTCTA
AGGCAATAAAATATGAAAAATACATAATACGTATTTTCATATTTATAGTATTAAACAAACGGATTGGCAAATAAAAGTACTAATATGAGTCCATAAATTG
TTAAAGCTTCCATAAAAGCCAAACTAAGCAATAAAGTACCTTGTATTTTTCCCTCCTCCTCGGGCTGTCTCGCGATACCTTCTGCAGCTTGGCCCGCAGC
AGTACCCTGACCAACTCCAGGTCCAATAGAAGCAAGTAAAGTAACTGATAATGACAGCTGTTTATAGGAACTATTGATGTGACCTTTGAATGAGATTCTG
GCAAGTTTTAGTAGATATAATTCACAGAAGAAAGTAAAATACATGTAAAAACGTGAACTTGATAACATTCCCAAACATTTGGCGATTTCAAATGTGTTGA
CGGGGACTCATTTTCTTGATGAATCATTTTTTTGGGCAGAGGACGAACTGGAAATATACACAAAACCATCCACTGTAGGTAAACATTTTGTGGTGATTGA
ATAGATAAAGAACAGATATCAGTATTACATACTAAATTTATGTTACCTAATGTTAAACCAGGTTCAAATAAGTGTACTTCCAGAAATTTCCCAAAAAGAC
AAAATGGGTACATTTTGTTTAAAATAACATAATGCCAATCTCCTCCCAATTTTAGGACTAGGATCCTCCCAAAAAAGTATACATGTAGCACATTATGGTC
CCCCC