« Back to Actinidia chinensis search


Detailed information on CNT30567604


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021685Actinidia chinensisCitrullus lanatus81.1272.3797.37838forward
CNT30381277Actinidia chinensisManihot esculenta97.5872.8393.651008forward
CNT30356068Actinidia chinensisLactuca sativa9434.0294.95971forward
CNT30433872Actinidia chinensisPapaver somniferum97.8741.2793.771011forward

Expression of CNT30567604

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCASQRASKPVRRKEADWRDPLAGCTADRP*

>peptide 2 (34 aa)
RRDYPLSLSISISGGKETYKDSLSNGERTGNSPA*

Sequence

>CNT30567604
TCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAATAGCCC
AGCTTGAAAATCGGGCGATCTCGTTGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAG
GGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGACGAGTCGGGTTGTTTGGGAATGCAGCCCCAATCGGGCGGTAAATTCCGT
CCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGCGGGATCCCCTAGCGGGTTGCACCGCCGACCG
ACCTTGATCTTCTGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGG
TGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGT
TTCCCTCAGGATAGCTGGAGCCCGTGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTT
AAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGA
ACCGGAAGCCGGGTTACGGTGCCTAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAA
TCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGAGGCAAGTG
CTAGGCCCCGATGAGTAGGAGGGCGCAGCGGTC