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Detailed information on CNT30567603


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730436Actinidia chinensisCorchorus capsularis66.6962.7195.47883forward
CNT30312015Actinidia chinensisCamelina sativa66.6937.0495.36883reverse complement
CNT30356177Actinidia chinensisLactuca sativa57.763.5697.77764forward
CNT30115277Actinidia chinensisEutrema salsugineum60.3580.395.62799reverse complement

Expression of CNT30567603

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MQPQSGGKFRPRPKPGQLLRLWRRLCLDRGWQRAPLACFGICALLAPACGLPIRPVLKHGPRSLTCVRVNGRVNP*

>peptide 2 (50 aa)
SGQWLTFSRQWVDKPLRPVVLAPIANGLLLTLMCRYHGFDRDPRSGGITR*

>peptide 3 (30 aa)
MCASQRASKPVRRKEADWRDPLAGCTADRP*

>peptide 4 (29 aa)
LGNGSHFLGNGLTNRCVLLCLPPLLMVYF*

Sequence

>CNT30567603
TCTGGGCAATGGCTCACATTTTCTAGGCAATGGGTTGACAAACCGTTGCGTCCTGTTGTGCTTGCCCCCATTGCTAATGGTTTACTTTTGACCCTAATGT
GCCGTTATCACGGCTTCGATCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCC
CTTAGTAACGGCGAGCGAACCGGGAATAGCCCAGCTTGAAAATCGGGCGATCTCGTTGTCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGG
GCCCAAGTCCCCTGGAAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTCGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGACGAGTCGGGTTGTTTGG
GAATGCAGCCCCAATCGGGCGGTAAATTCCGTCCAAGGCCAAAGCCCGGGCAGTTGTTACGCCTGTGGAGACGCCTTTGCCTCGATCGTGGCTGGCAGCG
CGCGCCTTTGGCGTGCTTCGGCATCTGCGCGCTCCTGGCACCGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGT
GTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGCGGGATCCCCTAGCGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAA
GGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA
CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGG
AGCCCGTGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGC
GGCTGCTTTGTTGAGCCGCGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACG
GTGCCTAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTA
ACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGAGGCAAGTGCTAGGCCCCGATGAGTAG
GAGGGCGCAGCGGTCGCACCACCC