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Detailed information on CNT30567082


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ZPN9|TBB2_ELEIN, E-value = 3e-76

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692476Actinidia chinensisOryza sativa70.4554.182.58310forward
CNT30674634Actinidia chinensisSetaria viridis72.54486.52319forward
CNT30377201Actinidia chinensisArabidopsis thaliana77.7359.7984.8342forward
CNT30629386Actinidia chinensisVigna unguiculata2542.6484.55110forward
CNT30252641Actinidia chinensisAvena sativa67.7336.6583.89298forward
CNT30261872Actinidia chinensisBrassica rapa75.2337.485.5331forward
CNT30614070Actinidia chinensisArabis alpina77.7324.7585.09342forward
CNT30608822Actinidia chinensisGossypium raimondii59.7739.2582.89263forward
CNT30209019Actinidia chinensisHelianthus annuus70.2337.0185.11309forward
CNT30681848Actinidia chinensisTriticum urartu67.7333.6786.58298forward
CNT30722532Actinidia chinensisTriticum spelta32.9521.0885.52145forward
CNT30341625Actinidia chinensisEragrostis tef77.7335.0884.5342forward
CNT30595566Actinidia chinensisOryza meridionalis37.733386.14166forward
CNT30370171Actinidia chinensisOryza glumipatula74.5538.6882.62328forward
CNT3036150Actinidia chinensisCucumis melo26.8235.0187.29118forward
CNT30330123Actinidia chinensisDioscorea rotundata64.5527.983.1284forward
CNT3099786Actinidia chinensisOryza rufipogon42.7340.9686.7188forward

Expression of CNT30567082

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MEVEFPMKVDAMESPFGGMSQTLDFTLLGIHSTK*

>peptide 2 (52 aa)
LVLGHKIIHVALGFGELHLVHSFPSIPVQESFPPEHSSELLAHTPEHFLNGS*

>peptide 3 (48 aa)
WYSDTRSFMLLSASVNSISSIPSPVYQCKKAFLLNIAVNCSLTRLNIS*

Sequence

>CNT30567082
GCTGGTACTCGGACACAAGATCATTCATGTTGCTCTCGGCTTCGGTGAACTCCATCTCGTCCATTCCTTCCCCAGTATACCAGTGCAAGAAAGCTTTCCT
CCTGAACATAGCAGTGAACTGCTCGCTCACACGCCTGAACATTTCCTGAATGGAAGTTGAATTCCCAATGAAGGTGGACGCCATGGAAAGTCCCTTCGGA
GGAATGTCACAAACACTGGATTTCACATTGTTAGGGATCCACTCCACAAAGTAAGAAGAGTTCTTGTTCTGAACATTGATCATCTGCTCGTCCACCTCTT
TGGTGCTCATTTTGCCCCTGAACATGGCTGAGGCAGTGAGGTCAGAGGAGCAAAACCCACCATGAAGAAGTGGAGACGGGGGAAGGGGATTAGGTTCACA
GCAAGCTTGCGGAGGTCAGAGTTGAGTTGACCAGGGAAGC