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Detailed information on CNT30566808


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692294Actinidia chinensisOryza sativa11.7620.059080forward
CNT30538793Actinidia chinensisBrassica napus12.2121.591.5783forward

Expression of CNT30566808

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MQFLSLVSRCFVMLIVLSVPKIVLLSAFGAKHSSFYHY*

Sequence

>CNT30566808
GATTAGAGTCTCAACCGACACTCAAGTTTGGAAACCCTAGTCCGATATATACCAAATGAGATCTCTTATCGTCCCAGCAGTCGCACTATCTGGTTACTAC
GGGGATCTGTGAACACAGACGGAAGAGAGAGAGTGAGAGAGTTGAAGAGAACTACGAGTCACGATGAGGGCTAAGTGGAAGAAGAAGCGCATGAGGAGGT
TGAAGAGAAAACGCCGAAAGATGAGACAGAGATCCAAGTAGACACGTGAACGTTACTTCTCCTGACGTTCCTTCAACTTCTTCATTGGTTATCGGCTGGT
GCCTGAGTTGGAGGGGAACTTGGAGTGAGAAGCCTTCACTGTCTGATGCAGTTTCTATCTTTAGTTTCAAGATGTTTCGTGATGTTAATTGTGTTGTCAG
TGCCGAAAATTGTCCTCCTTTCAGCATTTGGGGCTAAGCATTCCTCTTTCTACCATTACTAGAAATGGACTTGAATTTGACCGTGATGCGTCATATGCAT
TTTAGAGAGCTAATTGCCTGATGGTGGACAACATATGGTGCTGTTAAATTGCTCATTTGCATAGGATGATAACACGCATCGGCCCGGGCTCGTTTTTGTT
TTTATTTATCTTTTGATTGGATTTTTAACTTTAATTTTTTTGATTGAATATTCTAAATAAAACTTAAATTATTTCGTAAG