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Detailed information on CNT30566784


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 3e-130

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Actinidia chinensisOryza sativa10.9220.789.1683forward
CNT30675624Actinidia chinensisSetaria viridis27.533.1285.17209forward
CNT30523385Actinidia chinensisSetaria italica25.1325.0781.68191forward
CNT30512942Actinidia chinensisJuglans regia44.7467.0683.82340forward
CNT3019808Actinidia chinensisCitrullus lanatus36.1841.0486.91275forward
CNT30729348Actinidia chinensisCorchorus capsularis29.0824.4282.35221forward
CNT30379140Actinidia chinensisManihot esculenta41.9737.9384.64319forward
CNT30526134Actinidia chinensisPhaseolus vulgaris42.550.7186.07323forward
CNT30630919Actinidia chinensisVigna unguiculata42.524.2586.07323forward
CNT30712364Actinidia chinensisGlycine max42.581.3683.9323forward
CNT3094731Actinidia chinensisSolanum tuberosum41.7121.1285.8317forward
CNT30187977Actinidia chinensisSecale cereale38.954184.8296forward
CNT30510227Actinidia chinensisSolanum lycopersicum41.7127.0785.17317forward
CNT30554909Actinidia chinensisOryza glaberrima22.7644.9481.5173forward
CNT30145670Actinidia chinensisMedicago truncatula2546.6886.84190forward
CNT3061941Actinidia chinensisArabidopsis lyrata12.536.5488.4295forward
CNT30613762Actinidia chinensisArabis alpina42.2480.2583.8321forward
CNT30606420Actinidia chinensisGossypium raimondii33.0343.9686.45251forward
CNT30652959Actinidia chinensisRosa chinensis26.3241.5885200forward
CNT30204348Actinidia chinensisHelianthus annuus14.0833.6585.05107forward
CNT30688537Actinidia chinensisTriticum urartu9.3430.7490.1471forward
CNT30348495Actinidia chinensisEragrostis tef27.8971.1482.08212forward
CNT30362691Actinidia chinensisSorghum bicolor30.6623.5684.98233forward
CNT30154320Actinidia chinensisPrunus persica11.7124.1288.7689forward
CNT30418103Actinidia chinensisPapaver somniferum42.2482.3184.42321forward
CNT30704690Actinidia chinensisPrunus avium42.3715.8587.89322forward
CNT3022206Actinidia chinensisPopulus trichocarpa44.3461.9582.79337forward
CNT30318584Actinidia chinensisAsparagus officinalis37.3723.3984.86284forward
CNT30103468Actinidia chinensisOryza rufipogon22.7633.0881.5173forward
CNT30558289Actinidia chinensisPanicum hallii24.7432.0379.79188forward
CNT30551470Actinidia chinensisOryza brachyantha41.7172.8784.86317forward

Expression of CNT30566784

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MRHFLDLLLFLLFLLLLFVNILYLSFLIFLLFLVLIIRNFLLCCLLNPQRDWVTDEFRMLLDQILQSALLKTLTRCVSCDSE*

>peptide 2 (60 aa)
IHNTLHKAKVFGDQILTVIHDKDSAHIKLDVVGFLLCVEEIKRRPLRNKENSLKLQLTLN*

>peptide 3 (55 aa)
MNSECFLIKSFSLRSSRLSPDVSLVIVNDPPAWDSHTYCSSSLCFDVTMTFSETK*

>peptide 4 (50 aa)
MLRCHYDLLRNQVSRIETNTKLPDHAHISTSSKSFHELFGPRPCNSTEIVH

Sequence

>CNT30566784
ATCCACAATACCCTTCACAAAGCTAAGGTATTCGGGGATCAGATCCTCACAGTTATCCATGATAAAGACTCGGCGCACATAAAGCTTGATGTTGTTGGGT
TTCTTCTTTGTGTCGAAGAGATCAAACGGCGCCCTCTTAGGAACAAAGAGAATAGCCTTAAACTCCAATTGACCCTCAACTGAGAAGTGCTTCACAGCTA
AGTGCTCCTCCCAGTCATTGGTAAGACTCTTGTAGAAAGCAGCATATTCTTCCTTTGTGATTTCCTCCGTCTTCCTCATCCAGATGGGCTTCTGCTTATT
CAACAAAGACCACTCATGAGACACTTCCTTGATCTTCTTCTTTTTCTTCTCTTCCTTCTCCTTCTCTTCGTCAACATCCTCTACCTTTCCTTCCTCATCT
TTCTTCTCTTCCTCGTCCTCATCATCAGAAATTTCCTTCTCTGTTGTCTTCTCAATCCACAGAGAGATTGGGTAACTGATGAATTCAGAATGCTTCTTGA
TCAAATCCTTCAGTCTGCGCTCCTCAAGACTCTCACCAGATGTGTCTCTTGTGATAGTGAATGACCCTCCAGCTTGGGACTCCCACACATATTGCTCATC
ATCATTATGCTTCGATGTCACTATGACCTTCTCAGAAACCAAGTAAGCCGAATAGAAACCAACACCAAACTGCCCGATCATGCTCACATCAGCACCAGCA
GCAAGAGCTTCCATGAACTCTTTGGTCCCAGACCTTGCAATAGTACCGAGATTGTTCACC