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Detailed information on CNT30566740


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676252Actinidia chinensisSetaria viridis15.6232.4178.5200forward
CNT30381030Actinidia chinensisManihot esculenta14.8445.1381.58190forward
CNT30708255Actinidia chinensisGlycine max15.5547.8486.93199forward
CNT30158256Actinidia chinensisPistacia vera13.4427.9284.3172forward
CNT30597660Actinidia chinensisFraxinus excelsior9.6925.189.52124forward
CNT30651855Actinidia chinensisRosa chinensis10.7838.3385.51138forward
CNT3032713Actinidia chinensisTheobroma cacao13.8335.984.18177forward

Expression of CNT30566740

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MASKINALTSSNLSSERETSARSLQAFPSDASS*

>peptide 2 (42 aa)
MSADFPHCRVHLCVQKLRTHFSKSLFLSVTLFIHSTRVKTKG*

>peptide 3 (49 aa)
MAIVPRQVSVDCSPNTPKIQFLPIKSRMNRTSKHAMKLQYQIIQAFISS*

Sequence

>CNT30566740
GCCCCATTTTAGGAATAAAGACTAAAAAACACATTTTTCAAGAAAATTAGCCTTGATTTACACCTGCAAACGCCCGTGAACTTTGCAGTTGGAAATGATA
GGATTTGTTGTTCGGTGAGTATTGTGCTTTCAATCTTTATATCCATGAGTAGTTCACTTGTGGAGAAGGAATGTTAACTGCCACCACACGATGATTCAAT
GTGGATAATTGCTGATGATACTTGATAAAAATTCAGCACTGGTGCCCAATGGCAATTGTTCCCCGGCAAGTATCTGTTGATTGCTCTCCCAATACACCTA
AGATTCAATTCCTACCGATTAAGAGCCGAATGAACCGAACCAGCAAACACGCCATGAAATTACAATACCAAATCATACAAGCATTCATTAGCTCGTGAGA
GCGAAATCGACATAGTATTTTTACATACGCCCAGAAGGGACAAGTAAAAGCAATTACGAAAGCAAGTCGCCATAACAGAAGCAACTTCAGCAGCAGCAGC
AACAACAACAACGCAAACCTAGTTTGCCTTATTTAATTAAACATGAACATGCAAATTCCCACAGCGTAGTAGTAGTACCTTATTTAATTAAAGACGCACA
CAAACCATTGAACATTCTTCAAATGCCCAAATTCTCAGTGCTGAACTAGGGCATCATTTGCTTCTTCACGAGATTGAGGATTGTCATCTGGCTCCTCAAG
CAAGTTCTCAGCTGTGCTGCCGCTTCCATCATCAGCACAAGAGATGGCTTCAAAGATCAATGCCTTGACTTCTTCGAACCTCTCCTCCGAAAGGGAGACC
TCAGCAAGGAGCCTCCAAGCATTTCCTTCAGACGCCTCCTCATAGTCCTCCTTCCTCTTCAAAACCATATGTCCGCTGATTTCCCACACTGCCGGGTTCA
CTTGTGTGTCCAGAAGCTCAGAACTCACTTCTCCAAGAGCCTGTTTCTCAGCGTAACACTGTTTATTCATTCAACAAGGGTAAAAACAAAAGGTTAGGCA
ACCCTCGAAAAAAAGAGTTCAATAAGCAGATTACATATCAGAAAAACTACACGAAGCAATATGGCTTCACCTGCGGTAAAAGAAAGATACGCTTTCCAGA
ATCGGAGATAAGCACATTGTAAGGTATGTTGTTGCCTTGAAGGCAAATGCTGGAATCAGAGACGGCATTGGACAAATCTTCCAGAGTATTTCCACCCTCG
AAAACAAGCCCTCTGACTGGATAATTTAGCAGCTCAGAGATTTTCACCCCACCATTCAGAGTAGTTATCTTCCTAGTGGG