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Detailed information on CNT30566738


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522415Actinidia chinensisSetaria italica23.1224.7890.3683forward
CNT30547369Actinidia chinensisIpomoea triloba22.2810.7791.2580forward
CNT30379194Actinidia chinensisManihot esculenta25.3529.9385.7191forward
CNT30587665Actinidia chinensisMusa acuminata19.522.5894.2970forward
CNT30232760Actinidia chinensisAnanas comosus20.8916.459275forward
CNT30714946Actinidia chinensisMalus domestica golden24.2314.9794.2587reverse complement
CNT30339265Actinidia chinensisEragrostis tef23.1225.9489.1683reverse complement
CNT30354850Actinidia chinensisLactuca sativa20.339.1790.4173forward
CNT30319113Actinidia chinensisAsparagus officinalis20.619.1994.5974reverse complement

Expression of CNT30566738

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MRQAGFTEQRKPPALYGGRITGQCFPGSVTPNGLVSSNGHLFYF*

Sequence

>CNT30566738
GCTTGGTGGCGCAAGCCTGTGACCCAAGTGGGGGCATCAAGGTGACTGGACATGGGCTGAGCCCAGTAGGTTGGGCCTGCGGTTGCTAATTCTGGCCCGC
CCGTTCCAAGTGGAGAGTTGGGCCATGCGATCCATTCGAAAGTTTGGGCCTCGTGGTTCCTAGAGCGGAGGGCAATGCGTCAGGCTGGCTTCACAGAGCA
GCGAAAACCTCCCGCTCTCTACGGTGGAAGGATTACGGGCCAGTGCTTCCCAGGCTCTGTAACGCCCAATGGGCTGGTCTCATCGAACGGTCACCTTTTT
TATTTTTAGATTTGGGAAAAATTTACTGCTTCCCCCCTTTTTTATATAAAAAATTTCAA