Detailed information on CNT30566242


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LMK4|IPGL1_ARATH, E-value = 7e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506280Actinidia chinensisNicotiana attenuata3.226.7894.9479forward
CNT30191267Actinidia chinensisSecale cereale3.1222.6594.8177forward
CNT30544783Actinidia chinensisBrassica napus3.1224.0693.5177forward
CNT30236394Actinidia chinensisBrassica oleracea3.1220.8193.5177forward
CNT3075181Actinidia chinensisBrassica juncea3.1221.193.5177forward
CNT30261820Actinidia chinensisBrassica rapa3.1224.693.5177forward
CNT30612531Actinidia chinensisArabis alpina3.2420.19080forward
CNT30126894Actinidia chinensisCorymbia citriodora3.1621.6194.8778forward
CNT30115210Actinidia chinensisEutrema salsugineum3.1631.7193.5978forward

Expression of CNT30566242

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MVLFWVISFECDKLIICLPSSHTSKTCPLGIVAILCVTQGSEVLS*

>peptide 2 (50 aa)
MVQGLIQGSSGPGRRKQLPSMHLLFSLATGGNASIQPFHQLSKTVLHRAT*

>peptide 3 (50 aa)
MKGKCKKLGKSSSSDCTCSPLFLRGRFGFELMEKHQMPTSNTTNLLTSPL*

>peptide 4 (32 aa)
MPPHRKYLLLLDLLPIYELIGSQFRQSCSLDL*

>peptide 5 (34 aa)
MDFQFQLKFATIALMTPLKPLWYYFGLFLSNATS*

>peptide 6 (31 aa)
MRQVNNLLAIFSHFENLPSGHCGNFMCYPGE*

>peptide 7 (29 aa)
MASLSPALSVLSTFLSLPCVFGVCQTFWF*

Sequence

>CNT30566242
TGATCCGTGATTCCGGGTTAGTCTGGATACGGCCCATACAACCCAGCCCGCGGGCATTCTGCTAGGGTTTTCAGATAAATAGCACCCCTGCCCTGATACT
CCTGACCCCACTTGAACCAAGCCTCGGCCCTCGTTTCGGATCAAAGTCGAAGAAAAGAAGAAAGGAGGGTTTGTCACTGTATCACAATGAGAGCTAAGTG
GAAGAAGAAGCGCATGAGGAGGTTGAAGAGAAAGCGCCGAAAGATGAGGCAGCGATCTAAGTAACAATCGATTGCTGTTTCTCTATGGCATCTCTGTCTC
CGGCTCTCTCGGTGTTGTCAACTTTCTTATCTTTGCCTTGTGTTTTTGGCGTTTGTCAGACATTTTGGTTTTAGTTCCATGGTTAGTTAATCGTTTTTGA
TGTATGGATTTTCAGTTTCAGCTAAAATTTGCGACTATAGCTTTAATGACTCCACTTAAGCCTTTATGGTATTATTTTGGGTTATTTCTTTCGAATGCGA
CAAGTTAATAATCTGCTTGCCATCTTCTCACACTTCGAAAACTTGCCCTCTGGGCATTGTGGCAATTTTATGTGTTACCCAGGGGAGTGAGGTATTGAGT
TAACCATAGGACAGCATTCTCATTGTTACAAGTCATATGACTCATATCTACCCAATGTTACAGTAACCAATTTTGAAATGAGGGTACATTGTTTGTGGTT
AGGGTTGACAATGTTTCATTTCGACATGATAGAATGGTGGGAGGATATGCGTTAATGAATGAATATGCTTGCAATAGGCTCTTAATTTTTGGAATTTGGC
TGCATTAACTGATGAACACTTTCTTTTGTTTTTTGCATGAAAGGAAAATGTAAAAAATTGGGCAAGTCTAGCTCAAGTGATTGTACTTGTTCCCCTTTGT
TTCTAAGGGGGAGGTTTGGGTTCGAGCTTATGGAGAAACACCAAATGCCTACTAGTAATACAACTAACTTGCTAACATCCCCTCTGTAGCAAAATAAAAA
AGTAAAAAAAAGAAAAGAAAAGGACTTGTATATATATCACTTTATGACAATATAATGGCCCCATCTTGCTGTAGTCGCATTCTCCATCTATACTGGTAGT
GGCTTGGGAACTTTAATAGTGGCGACGGATGAATCAAACATGGTACAGGGTTTGATTCAAGGTTCTTCAGGCCCCGGTAGGCGAAAGCAGCTTCCCTCAA
TGCATCTGCTTTTCTCTCTGGCCACTGGGGGAAATGCTTCAATACAGCCCTTTCATCAACTAAGCAAGACAGTTCTCCATCGAGCCACTTGACAAATGCC
TCCACATCGTAAATATCTGTTGCTACTGGACTTACTGCCAATATATGAGTTGATCGGTTCTCAATTTCGCCAATCATGTTCCTTGGATTTATGACTGGAG
ATGTTCCTACCTGACTTGTTTTGTTCTCCTTTTGGGCATCTCGCTTCATAAGCAAACGGTAGAACTCCACTACCTCTGGCACACGACGCACTGCTTTTGA
TCGAGCTAACAAGTTTGAAGGTCGTGGTGGTGGAGGTGGTGGTGCTGTTTGCACTTTGTAGTCGTGCACCTTATGTGAAGGGGCGGACGTAATTGGCTTC
GATGGTGGTGGTGGTGGTGGTGATGGTGGTGGTGTTCTTGCTGGTTTTCCCTTTTCAACTGCAGATTTGAGAAAATCGTCTGCTGGCTTCAAAATCTCCA
CGGCTATACTTTTTACTGCAATCTCAGACGGTACTGTAGCTTTCTGCTGAAATTTATCTGCATTTGCGCTATCCATGGAGTTCTGCAACTTCTTCCAGAG
TCCTCGTTTTCTTTCTCCAGCGAATTGTTCCATGCCATAGCTGCTTCCAGTTCTTTCCTGAGGAAGGCAATTCTCGAGTCATCATCGTCTACCGGCATTC
TCCTTCCTGTTCTGCTTCCTTCGAAAAGAAAAGCATGGGGAGAGAAGGGAGATAAATTGAATTTCTTGATTTTCCCTTTTATGCATGCCTTACTTCTGAA
GAAAGGTATCCTTACCTAAGGTTGAAATGCTAATACTAAAAATCGCCTTAGATTTGTCACAAATGTAGTTCAACATAACACATTTCGGTTTTCAAGAAGG
GTATTTTGGATAATTGGCATTCTTGGTCTGCTAGATTTGTGGCTTTTCTTGATTTACGCTTAAACTTTAGATGCTTAAGTAGGTGATAGATTTCTTGATT
TGGCTGGCATTAGTTGTCTGTGTGGAGTAGCTATCCCGTCCAAGTTGGACATGTTAGGTGCTATTGAATTCTCTGGTCAAATTTACCTTGTGACTCCTAA
TAATTCCTAAATATTTTCTTTGCGAACCATTTTTGGTCCTGGAAATCTTCAATTAACTCCCATCTACCTGCAAATAAAGGCCTCATTGTATTGAATGCTG
CAGTGTGGTGTGTGTGTGTGTGTATGTCTTGTAATCTGGAGCATGGGGTGGCTTCAATAACCCTTGAGATT