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Detailed information on CNT30565894


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30120561Actinidia chinensisCitrus clementina26.2234.2282.47194forward
CNT30174921Actinidia chinensisVigna angularis16.492586.89122forward

Expression of CNT30565894

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MHHGFPYMIKRLPSPSSLSLSLSLSLSLQESG*

>peptide 2 (29 aa)
GGVALYNLPIGITLRSSSLNYCVVCLPSS*

>peptide 3 (63 aa)
MLGLEKLVVNLKSKLRSLKLKKPYDKIEKSESMRVEIRSRKARKIIEETMKIADSPKTKTYAF*

Sequence

>CNT30565894
GGGGAGGAGTGGCACTATATAACCTTCCAATAGGAATAACATTAAGGTCTTCAAGTCTCAACTATTGCGTGGTCTGCCTTCCAAGCTCTTAATGCCTGCA
TTGTGACGTCCAACCGTTATTCATCCATATCATCTGTCTCACTTGGTTCTTTCCAAACTCTCTCTCTCTTAAAAACCCTACTACTAGCTTCTTTAAACCC
ATCTATTTCCTTATTTCTTTCATTTAGGCAAGCCAAATTCTCTTAGCCACAGTCCTCAGACAGGTTTATTGATGTTGGGTTTGGAAAAGTTGGTGGTGAA
CCTCAAGTCCAAACTGAGGTCTCTGAAACTGAAGAAACCTTATGACAAGATCGAAAAGAGCGAAAGCATGAGAGTGGAGATAAGAAGCAGGAAGGCTCGT
AAAATCATCGAAGAGACCATGAAAATTGCGGACTCCCCAAAAACCAAAACTTATGCTTTCTGAACTTTTTGATTAAATATGTAACTGTGAACCACTCTCT
CTCTCCTACTGGTAAATATGCACCATGGTTTTCCCTATATGATAAAGAGACTACCTTCTCCTAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
GCAGGAATCAGGATAATGACTACAATATCAACACCATATGGTGTATATTTAGGGATAGATTTAGCTACATATGGTGCATAACCCTTTTAACAGTTTATGA
TTATGATTTTCTTCTAATGGAACATTCTTAATTAGTACAA