Detailed information on CNT30565764


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3079106Actinidia chinensisBrassica juncea4.6622.8593.4461forward
CNT30214058Actinidia chinensisHelianthus annuus5.2726.1494.269reverse complement
CNT30107453Actinidia chinensisOryza longistaminata5.2726.0495.6569forward
CNT3035140Actinidia chinensisCucumis melo5.2728.0595.6569forward

Expression of CNT30565764

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MYVKYVIIWSFGRVGYVVSLLLVFISTLVPLLWFDIYDLIMFLAFLMI*

>peptide 2 (73 aa)
MKLWFFQAIAQDKSMAEVKNEGGRRRRRRRTTTTTTTTCTRNACQRKTRSHLHRRKPRRKPRFRKEAEIRKLH*

>peptide 3 (52 aa)
MHAKGKPDLTSIDENQDENQDSEKKQRLENSTDFVIVAEDEDENEDSEEERR*

>peptide 4 (51 aa)
MAAISLRIPLPSSIWITFFRQGLGSPTYLSPESIFLRIPAPITDASLKQDN*

>peptide 5 (42 aa)
MRMRMRTQKKKDDEDDEDEDGDYENSNGQAVVDRKRQRDFDR*

>peptide 6 (38 aa)
MDIIIALMKLCFSLKKNGRPTVGFEPTTTGLRALRSTD*

>peptide 7 (34 aa)
MKMMRTKMETMRIRMDKRLLTVKGKGILTDDKGN*

>peptide 8 (30 aa)
MVHQGLFGPTSNYIREAHYNQHKVKALLLF*

Sequence

>CNT30565764
AGCTCCCTTGTTTTTGGAATGTAGTATGATAGAGTAATTTATAACGAAGCATGGACATAATAATAGCTTTGATGAAATTATGTTTTAGCTTAAAAAAAAA
TGGTCGCCCCACAGTGGGGTTCGAACCCACGACCACAGGGTTAAGAGCCTTGCGCTCTACCGACTGAGCTAGACGGCTGTAAGGTGTAGTTACGTACTTT
GTACTTCATCCACATATTCATACAGACTTTTTAAATGCCAAATCCGTTTGATTACAGTTTCCCTTGAGAACACAGCACCCATCCCCAAAAACCTAATGAA
GCTTTGGTTTTTCCAGGCGATTGCACAAGACAAGTCCATGGCAGAGGTGAAAAACGAAGGAGGAAGAAGAAGAAGAAGAAGAAGAACAACAACAACAACA
ACAACAACATGCACACGTAATGCATGCCAAAGGAAAACCCGATCTCACCTCCATAGACGAAAACCAAGACGAAAACCAAGATTCAGAAAAGAAGCAGAGA
TTAGAAAACTCCACTGATTTTGTGATTGTCGCCGAAGATGAGGATGAGAATGAGGACTCAGAAGAAGAAAGACGATGAAGATGATGAGGACGAAGATGGA
GACTATGAGAATTCGAATGGACAAGCGGTTGTTGACCGTAAAAGGCAAAGGGATTTTGACCGATGACAAGGGAAATTGATCGAAGAGTCTCTGCTTGACG
ATTCCAGCAAAGCTGGGAGTGGATCTGACGGCGATGGCAGCGATCTCTCTGAGGATCCCCTTGCCGAGCTCGATTTGGATAACATTCTTCCGTCAAGGAC
TCGGCTCCCCCACGTATCTCAGCCCGGAGTCTATATTTCTAAGAATCCCGGCACCAATCACTGATGCTTCATTGAAGCAGGACAATTGAATGTATAATTA
TGTATGTTAAGTATGTAATAATTTGGAGCTTTGGACGGGTTGGGTACGTTGTTTCCTTGCTTCTTGTTTTCATTAGTACTCTCGTACCGTTGTTGTGGTT
TGATATATATGATTTAATCATGTTTTTGGCTTTTCTTATGATATAGTTATTGTTTTTGAATTATCGGCAACTGGGGGGGTTATGGTTTCATGTGGAACTG
AATAGATTTTAATTGATCGGTGGGGACAATCAATGGTTCATCAAGGTTTATTTGGGCCTACTAGTAATTATATAAGGGAGGCCCATTATAACCAGCACAA
AGTCAAAGCCCTTTTGTTGTTTTAGGGCTTTGTAGTACCCCGACTTTCTTTGTTCAAAGGCCACAATGATGGGGTGGCGGGCAACATGATGCTGTCCACG
TCCACAAAAG