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Detailed information on CNT30565750


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 2e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697930Actinidia chinensisOryza sativa24.1160.7880265forward
CNT30674998Actinidia chinensisSetaria viridis12.4736.0586.13137forward
CNT30519871Actinidia chinensisSetaria italica29.9449.782.37329forward
CNT30315797Actinidia chinensisCorylus avellana31.3952.1980.29345forward
CNT30547549Actinidia chinensisIpomoea triloba32.9446.7781.77362forward
CNT30698248Actinidia chinensisQuercus lobata32.9449.5984.25362forward
CNT30267640Actinidia chinensisChenopodium quinoa31.347.3881.98344forward
CNT3069241Actinidia chinensisQuercus suber32.1280.2385.27353forward
CNT30380641Actinidia chinensisManihot esculenta33.352.9781.42366forward
CNT30200079Actinidia chinensisPisum sativum33.4891.5480.71368forward
CNT30709007Actinidia chinensisGlycine max17.4780.6786.98192forward
CNT3048083Actinidia chinensisPrunus dulcis33.2151.9982.74365forward
CNT30177168Actinidia chinensisSecale cereale32.6748.3283.29359forward
CNT30284356Actinidia chinensisTriticum aestivum32.6755.6682.17359forward
CNT30220094Actinidia chinensisHordeum vulgare25.5748.9582.56281forward
CNT30398097Actinidia chinensisTriticum turgidum32.6746.9383.29359forward
CNT30591253Actinidia chinensisMusa acuminata9.132.0584100forward
CNT3084175Actinidia chinensisVigna radiata32.0333.7881.53352forward
CNT30508643Actinidia chinensisSolanum lycopersicum33.2147.4678.9365forward
CNT30443502Actinidia chinensisAegilops tauschii27.3948.6382.06301forward
CNT30240007Actinidia chinensisAvena sativa29.8558.4784.45328forward
CNT30655661Actinidia chinensisTriticum dicoccoides32.6766.3682.17359forward
CNT30309861Actinidia chinensisCamelina sativa15.6527.7484.3172forward
CNT30259840Actinidia chinensisBrassica rapa18.2969.5585.07201forward
CNT30613891Actinidia chinensisArabis alpina16.0143.6781.82176forward
CNT30474628Actinidia chinensisSaccharum spontaneum24.7522.8883.82272forward
CNT30141394Actinidia chinensisLolium perenne32.6756.0183.57359forward
CNT306284Actinidia chinensisZea mays8.6444.3989.4795forward
CNT30609694Actinidia chinensisGossypium raimondii24.4835.1283.27269forward
CNT30720909Actinidia chinensisTriticum spelta32.6754.9883.57359forward
CNT30477972Actinidia chinensisArabidopsis halleri29.9495.0979.94329forward
CNT30368649Actinidia chinensisSorghum bicolor21.255.4884.98233forward
CNT30622400Actinidia chinensisCajanus cajan33.7640.5582.75371forward
CNT30358481Actinidia chinensisLactuca sativa32.9439.5284.53362forward
CNT30414942Actinidia chinensisPapaver somniferum33.5845.3978.86369forward
CNT30644610Actinidia chinensisCannabis sativa19.3846.383.1213forward
CNT3053477Actinidia chinensisAmborella trichopoda33.5858.9580.22369forward
CNT3022780Actinidia chinensisPopulus trichocarpa5.6425.187.162forward
CNT30148402Actinidia chinensisBrachypodium distachyon10.8324.2485.71119forward
CNT3099660Actinidia chinensisOryza rufipogon11.3727.5988.8125forward
CNT30585391Actinidia chinensisEchinochloa crusgalli33.9457.383.65373forward
CNT3051266Actinidia chinensisCucumis sativus31.394679.13345forward
CNT30114434Actinidia chinensisEutrema salsugineum9.1925.3882.18101forward

Expression of CNT30565750

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MDSEFFWVDERSPSISLVGTVRIFLMLFGTDCDPRTVLYIQ*

>peptide 2 (30 aa)
MFEWICHMGMKVNLLSLRRAGSLNFEVHGL*

>peptide 3 (44 aa)
MGIVSQVGYLGLCLARLSPMQSSVLKFILFNLGLRGLKISIMHS*

>peptide 4 (98 aa)
KLNILGHNRDALSMNSAQICILKEANEVGLGSLLQGGDGGALEAQIGLEVLSDLSHQPLERQFPDQKLRALLVLPDLSQRHCPWPEPVRLLHAAGRRS*

Sequence

>CNT30565750
AAGTTGAATATCCTTGGGCATAATCGTGACGCGCTTAGCATGAATAGCGCACAGATTTGTATCCTCAAAGAGGCCAACGAGGTAGGCCTCGGCAGCCTCC
TGCAGGGCGGCGACGGCGGAGCTCTGGAAGCGCAAATCGGTCTTGAAGTCCTGAGCGATCTCTCGCACCAGCCTCTGGAACGGCAATTTCCGGATCAGAA
GCTCCGTGCTCTTCTGGTACTTCCTGATCTCTCTCAGCGCCACTGTCCCTGGCCTGAACCGGTGAGGCTTCTTCACGCCGCCGGTCGCCGGAGCTGATTT
CCTCGCCGCCTTCGTTGCAAGCTGCTTCCTGGGCGCCTTCCCTCCGGTCGACTTCCGAGCCGTCTGCTTTGTCCTCGCCATCGCTTTCGACACACAGATT
GAGAGAGAATTGAATGTTTGAATGGATTTGCCATATGGGGATGAAAGTGAATTTATTGTCGTTGAGAAGAGCGGGAAGTTTGAACTTTGAAGTACATGGA
CTCTGAATTTTTTTGGGTGGATGAACGTAGTCCGTCGATTAGTTTGGTTGGGACGGTGAGGATTTTTTTGATGTTGTTTGGCACAGATTGTGATCCGCGT
ACTGTGTTATACATCCAATAGGAAAAATGAACGATTTAGGCCGTTGATTAGTTCTTCTCAACGGTTAGGATGCTCCGGTTGATGTGCCAGCAGATATATT
CCTAACTAATGGGAATAGTTTCTCAAGTGGGCTACTTGGGCTTGTGTTTGGCAAGGCTCAGCCCAATGCAATCGTCAGTCTTGAAGTTCATTCTTTTTAA
TTTGGGCCTTCGGGGATTGAAGATTAGTATAATGCATTCTTAGCAAAATAACTTTGAAATGAGCAAATTGTAGAGATTTTACTAGAAATATACGAACAAT
GAGAGGCTTCAATATAGGAACAAATTGAAAATAATGGGTAGAACTATAAGTTTTTAAAACTTAACGTCACGTGGCCTCTCCTCATCACACAGTAGCTCCG
CCACTCACCCAATCACAATAGATATCAAACTCTTTTCTGTAAGAATTGAATCCACAATCTCATAATACCAAATGCTACTACACGACGCCTTAACCAAAT