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Detailed information on CNT30565281

BLAST search results

BLAST vs Swiss-Prot:
sp|P27774|KPPR_MESCR, E-value = 2e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30691096	Actinidia chinensis	Oryza sativa	54.91	26.72	82.1	257	forward
CNT30670674	Actinidia chinensis	Setaria viridis	43.16	28.45	82.18	202	forward
CNT30513083	Actinidia chinensis	Juglans regia	54.27	57.86	85.04	254	forward
CNT30372685	Actinidia chinensis	Arabidopsis thaliana	31.2	36.23	83.56	146	forward
CNT30628885	Actinidia chinensis	Vigna unguiculata	54.27	60.77	82.68	254	forward
CNT30708150	Actinidia chinensis	Glycine max	54.27	46.86	85.43	254	forward
CNT3087966	Actinidia chinensis	Vigna radiata	54.27	46.52	83.86	254	forward
CNT30552726	Actinidia chinensis	Oryza glaberrima	54.91	51.71	82.49	257	forward
CNT30145996	Actinidia chinensis	Medicago truncatula	51.07	58.44	84.52	239	forward
CNT30608349	Actinidia chinensis	Gossypium raimondii	22.22	20.55	90.38	104	forward
CNT30686133	Actinidia chinensis	Triticum urartu	16.67	31.2	85.9	78	forward
CNT30364562	Actinidia chinensis	Sorghum bicolor	31.84	15.8	80.54	149	forward
CNT30595648	Actinidia chinensis	Oryza meridionalis	54.91	42.48	82.49	257	forward
CNT30369615	Actinidia chinensis	Oryza glumipatula	31.2	26.4	85.62	146	forward
CNT30644238	Actinidia chinensis	Cannabis sativa	38.46	67.67	82.78	180	forward
CNT30575421	Actinidia chinensis	Oryza barthii	54.91	35.79	82.49	257	forward
CNT30116076	Actinidia chinensis	Oryza nivara	54.91	35.79	82.49	257	forward
CNT30114771	Actinidia chinensis	Eutrema salsugineum	29.91	36.65	82.86	140	forward

Expression of CNT30565281

Peptides detected in this lncRNA

>peptide 1 (30 aa)
GLNLLIHEIKVVGSWVKCSDPFLFPPSSVK*

>peptide 2 (74 aa)
MSLISVLESGFPPFGGSAAPPNTLVSLLMKVLFPHPESAANPITTVLFSAEHVIVAGLNGVECADCHSVCPEGV*

>peptide 3 (33 aa)
RALTCSYMRSKLLALGSSAVTPFFFLPVLSSEW*

>peptide 4 (41 aa)
MCRLPFCLPRRSLREFGDREKGALNWVYWDMIFFLFFHFGL*

Sequence

>CNT30565281
AGGGCCTTAACTTGCTCATACATGAGATCAAAGTTGTTGGCTCTTGGGTCAAGTGCAGTGACCCCTTTCTTTTTCCTCCCAGTTCTGTCAAGTGAGTGGT
AATCATCCAAACAGATCACAGTGGTCATGTCACTGATCAGTGTGTTGGAGTCTGGATTTCCACCCTTTGGTGGCTCAGCAGCACCACCAAACACACTTGT
GAGCCTCCTCATGAAAGTGCTCTTCCCACACCCAGAGTCAGCTGCCAACCCAATCACCACAGTTTTGTTCTCTGCTGAGCATGTGATTGTTGCTGGATTG
AACGGTGTAGAATGTGCAGATTGCCATTCTGTCTGCCCAGAAGGAGTTTGAGAGAATTTGGAGATAGAGAGAAGGGGGCCTTGAATTGGGTTTATTGGGA
CATGATTTTTTTTTTGTTCTTTCACTTTGGTTTATGAAAGACACAAATTAAGGGAGAGGTTGTGGTTG