Detailed information on CNT3056501


BLAST search results

BLAST vs Swiss-Prot:
sp|Q38890|GUN25_ARATH, E-value = 2e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316599Amborella trichopodaCorylus avellana10.4863.7380.66181forward
CNT30381644Amborella trichopodaManihot esculenta10.1933.8581.25176forward
CNT30609427Amborella trichopodaGossypium raimondii10.8929.7980.32188forward
CNT30654406Amborella trichopodaRosa chinensis8.428.7180145forward

Expression of CNT3056501

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCKKSTGSHGEAHVRPHSLRKKVLNSPKNI*

>peptide 2 (31 aa)
MLFLSSFLYYKKNYGQCFPNIVFKPNHYKFG*

>peptide 3 (44 aa)
MSKITYPMKRTLCESTWVLAKLRRTSLEKKVGPQYQPGVSAASR*

>peptide 4 (38 aa)
MLVGSCHHCPHKCIWARLGCVPPFPPTLARVLDLVLRD*

>peptide 5 (43 aa)
MSKFQYSSSKRHLSFSESVKLSMHVQEEYWISWGSTCATTLTP*

>peptide 6 (32 aa)
MGNAFQTLYSNQITTNLAKFCKIIVQDPIFGG*

Sequence

>CNT3056501
CCCATAAATTAAGAAGAGTTGGCAAATATTGAAACCAGATGCACAAAAGGACGGGCACAAATTACATGATTCTTTTATCATCAGCATCCCTCTTTGGGTA
GTCAAAAAGTATTAGCAAATACAAAGTATCACTCTATATGTCACACAGAGCACATAGAGAGTGAAAAACAATCAAGAATATTATACCTACAAACTATGAA
CACAACAAAGATTAAGAACAAGCAAATCCCCAACATCAAAGACCCCATGTAATCTCTCTTCATTCTCTAGCCCCGCTTTTTCTAGCTTAAGAACAAGTAA
ATACTGCTATCCTACAAAGGATTGTGGTGGCTCTCTCTCCCTCTATATCTCTCTCTGTCTCTCTCTCTCAAGGTTTCCAAGGAGTCGGAGAGAGCAACCA
AAGCAGCCACTAAAGCAGCATTGCCAGCGAGAGTGGGCTCGGTGTAATTGTAGTTTCCTCTTACATCTTTGAAACCATCATGCTTGTCGGGTCCTGCCAC
CATTGCCCCCACAAGTGTATTTGGGCTAGGCTTGGGTGTGTCCCTCCATTTCCACCCACCCTTGCAAGAGTACTTGATCTTGTTCTTAGGGATTGAAGCT
GCTCTATGGTGCACGTGTTTTGGATAGTGGTTTCCGAAACCCACAATATAGCTCATCTTTCGCGGGTTCTTACCTAGAATGTAATCAATCTGCAACATGG
AAAGTGGTTAAACATTAGTATGAGTAAGTTTCAGTATTCATCAAGCAAAAGGCATCTCTCTTTCTCTGAAAGTGTAAAGTTAAGTATGCATGTGCAAGAA
GAGTACTGGATCTCATGGGGAAGCACATGTGCGACCACACTCACTCCGTAAGAAGGTTTTAAATTCTCCCAAAAATATTTAGCTTACCCCAAAATTAAGC
TTGCATGTACAACAACAATACTAAGATGGGTCACTCCTAGGATTGGAGTGTTGTACCTACACCAGCAATGAAATGCTTTTTTTGAGTTCTTTTCTTTATT
ATAAGAAAAATTATGGGCAATGCTTTCCAAACATTGTATTCAAACCAAATCACTACAAATTTGGCTAAATTTTGCAAGATCATAGTCCAGGATCCCATAT
TTGGTGGGTAGGGGTGGGGGGGGGGGGCAACCGTCAGCTGAAAACTGTTTCAGTTTTACAGGCAGCAGGCCCATTTGAACAAAAGTCCCTTTTTTGGGGT
CATTTCTCCAAGCCTTATGTTTGGCTAAATTTTGCAAGATCACAGTCCACGATCCAACATTTGGGGTTCAACCCTCAGCTGCAAACTGTTTCAGTTTTAT
GTCAGCGTACCAATTTGAACCAAAGTATTTTTTTTTTTTTTTATTTGCCCTGAGATTTATCTTGTCATATATCAAATGATAGATAACTTACTCAGAAATC
AATGAGTAAAATAACTTATCCAATGAAAAGAACATTATGCGAGAGTACCTGGGTTCTTGCAAAATTGCGTAGAACATCCTTGGAGAAGAAAGTGGGGCCA
CAATACCAACCAGGGGTATCAGCAGCATCGAGATAATCAGCATAGATTGAAGCAAGGAAGGCCGCATTCACAACATACTGAAGAGGTTGAGGCCTTCCAT
GGTTTAACTGTATAAGTCCTCCTGCAGGGGTTTTTCACGATTCAGAACTCAAAATGTCATAGTAATAATCAGAAAGAAGATGATGATAGTAATATAAATA
ACAATAAAGTCGATTTCTTTGGTGGAG