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Detailed information on CNT30564991


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 6e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691492Actinidia chinensisOryza sativa56.4430.0482.89228forward
CNT30670956Actinidia chinensisSetaria viridis70.0525.3882.33283forward
CNT30519732Actinidia chinensisSetaria italica28.9640.7787.18117forward
CNT30640424Actinidia chinensisNymphaea colorata43.5621.1886.36176forward
CNT3020673Actinidia chinensisCitrullus lanatus36.1413.7383.56146forward
CNT30631130Actinidia chinensisVigna unguiculata40.3513.0181.6163forward
CNT30297784Actinidia chinensisTriticum aestivum35.6416.4486.11144forward
CNT30221117Actinidia chinensisHordeum vulgare2545.9191.09101forward
CNT30394052Actinidia chinensisTriticum turgidum35.6410.0686.11144forward
CNT30590722Actinidia chinensisMusa acuminata50.9946.8283.5206forward
CNT3085478Actinidia chinensisVigna radiata30.6921.6883.06124forward
CNT30541063Actinidia chinensisBrassica napus50.2525.5784.24203forward
CNT30234760Actinidia chinensisBrassica oleracea28.9638.3684.62117forward
CNT30437220Actinidia chinensisAegilops tauschii34.6524.4890140forward
CNT30463151Actinidia chinensisSaccharum spontaneum57.1845.9283.55231forward
CNT30133582Actinidia chinensisLolium perenne24.755088100forward
CNT30712987Actinidia chinensisMalus domestica golden2528.2982.18101forward
CNT30680472Actinidia chinensisTriticum urartu48.2727.9887.18195forward
CNT30365858Actinidia chinensisSorghum bicolor70.7979.0181.82286forward
CNT30595794Actinidia chinensisOryza meridionalis40.3574.4385.89163forward
CNT30706529Actinidia chinensisPrunus avium35.159.2387.32142forward
CNT30325169Actinidia chinensisAsparagus officinalis48.7674.3483.76197forward
CNT30102464Actinidia chinensisOryza rufipogon20.543.2787.9583forward
CNT30495761Actinidia chinensisDigitaria exilis35.1536.2283.1142forward
CNT30116468Actinidia chinensisOryza nivara69.3139.4483.93280forward
CNT30603734Actinidia chinensisOryza punctata48.761583.76197forward
CNT30112244Actinidia chinensisFicus carica5030.6184.16202forward

Expression of CNT30564991

Peptides detected in this lncRNA

>peptide 1 (57 aa)
GRVSRGRYAWRRWQRRPCRRERKFRRSQHQGRRPWPKRCLEFRRWSTWWATGRRPSR*

Sequence

>CNT30564991
GGGGACGTGTGAGTCGCGGGCGCTACGCTTGGCGTCGGTGGCAGAGAAGACCGTGTAGACGAGAACGAAAGTTCCGACGATCTCAGCACCAAGGCCGTCG
CCCTTGGCCCAAGCGATGCCTTGAATTCCGACGGTGGAGCACTTGGTGGGCGACTGGACGACGCCCATCACGGTGAGGATGGTGATGTAGAGGAAGAGAA
AAGTGGCCATGAACTCGGCGATCCCGGCCCTGTAGAACGACCACGACGTCAGCTCGCCGGGCTCGAACAGAGGCGCCGGCGGTGGCTCCGTGTAGTCCTT
GTCGCCTCCCTGCGCCGCCGTCCCGAGCGGCTGCCTCTCGGCGTACTTGTTCGCTCCCAATCTCACATCCTCTTCTTTCCCTTCCATCTTCTCTCTCTCT
CTCT