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Detailed information on CNT30564990


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524031Actinidia chinensisSetaria italica19.8630.5590.4884forward
CNT30549116Actinidia chinensisIpomoea triloba22.733.885.4296forward
CNT30375565Actinidia chinensisArabidopsis thaliana16.0827.5386.7668forward
CNT30631135Actinidia chinensisVigna unguiculata32.8611.8482.01139forward
CNT3046104Actinidia chinensisPrunus dulcis27.6626.4782.05117forward
CNT30612661Actinidia chinensisArabis alpina18.9127.688580forward
CNT3024497Actinidia chinensisPopulus trichocarpa17.9727.0588.1676forward
CNT3038976Actinidia chinensisCucumis melo2616.1183.64110forward
CNT30575194Actinidia chinensisOryza barthii16.3133.6688.4169forward
CNT30116009Actinidia chinensisOryza nivara27.1914.1384.35115forward
CNT3065055Actinidia chinensisSelaginella moellendorffii21.5124.6684.6291forward
CNT3039904Actinidia chinensisMarchantia polymorpha21.285.3486.6790forward

Expression of CNT30564990

Peptides detected in this lncRNA

>peptide 1 (57 aa)
GRVSRGRYAWRRWQRRPCRRERKFRRSQHQGRRPWCNRGLRSWPHRRASCTGHCITM*

Sequence

>CNT30564990
GGGGACGTGTGAGTCGCGGGCGCTACGCTTGGCGTCGGTGGCAGAGAAGACCGTGTAGACGAGAACGAAAGTTCCGACGATCTCAGCACCAAGGCCGTCG
CCCTTGGTGTAACCGTGGGCTACGAAGTTGGCCCCACCGCCGAGCGTCGTGTACCGGGCACTGCATCACCATGTAGAACACTGCCCTCGTTAGTGACAAT
TTCCGAGCCAGTAGAAGCCCAAATGTCACCGCCGGGTTAATATGTCCCCCTGCACAGAACAAAACCAACACAGCCAAGGAAAAGCTATTATTACCAAAAA
ATGATCATGAATAATGGATGGAAATTTATTAGTGTGATCGTTGGTTGTCACAAATGAATCAATACGGTAAATTATTTCTAAATATAACTATACATGTAAT
TAATGCTTAATTAAGGTTTTTTT