Detailed information on CNT30564215


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698134Actinidia chinensisQuercus lobata33.714.7788.7689forward
CNT30507461Actinidia chinensisNicotiana attenuata35.9826.2485.2695forward
CNT3094038Actinidia chinensisSolanum tuberosum28.0311.8885.1474forward
CNT30172489Actinidia chinensisTrifolium pratense38.647.9184.31102forward
CNT30104607Actinidia chinensisOryza rufipogon26.8919.7885.9271forward
CNT30726868Actinidia chinensisLupinus angustifolius32.5810.0884.8886forward

Expression of CNT30564215

Peptides detected in this lncRNA

>peptide 1 (44 aa)
AQAQSNDKFHALTSQIILEVITPPNIQVFLNGPGPTHNKPTYLT*

Sequence

>CNT30564215
TGCACAAGCTCAAAGCAATGATAAATTCCATGCATTAACATCACAAATCATCCTTGAAGTGATTACTCCCCCCAATATACAAGTTTTTCTAAATGGGCCA
GGCCCAACCCACAACAAGCCCACTTACTTGACATAATAAGGAAGGTCCAAGACATAGAGGAGGAAATAGGCCCAAAGGACCCCAGAAATGCCACCAAAGA
AGAACCCACCCGTGAACTTGGCCCACCTCAATCCCTCGGAGGAGCGGGCTCACGGCCGTCCGAT