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Detailed information on CNT30564047


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LW49|ERF4_NICSY, E-value = 4e-25

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548308Actinidia chinensisIpomoea triloba18.2120.6381.73104forward
CNT30515949Actinidia chinensisJuglans regia22.777.0880.77130forward
CNT30525755Actinidia chinensisPhaseolus vulgaris20.6716.8885.59118forward
CNT30234912Actinidia chinensisBrassica oleracea22.4227.5380.47128forward
CNT3051215Actinidia chinensisCucumis sativus22.0720.7280.95126forward

Expression of CNT30564047

Peptides detected in this lncRNA

>peptide 1 (50 aa)
HLIRTLKKNKIKTKRPKKRQIPVPPVAGVSIPGAERVLIHSRRPENRVEV*

Sequence

>CNT30564047
CCACCTAATTAGAACTTTAAAAAAAAATAAAATCAAAACCAAGCGGCCGAAAAAAAGGCAAATTCCGGTACCGCCGGTGGCCGGCGTCAGTATTCCGGGG
GCGGAGCGAGTCCTGATTCATTCTCGCCGACCGGAAAATCGAGTCGAAGTATAAGATGTGATTCGCCGACGGCGGAACTCCGGTAACCGGAGAAACGAAC
TGGTATTGCTGGAAAGGAAATCTCGCTCCGCCGCCGAACGAGAGGCTGAGATCCAGCGGCGGGGGCGATCCGGCCACCGGACTCGACGACTCGACGGTAC
TACTCGGACTCGGGCTCTGATTACAATTACTCTTCTTGATCTCGACTTTGTTCTTGAAATCAAAATCGTTACTCACGTTCTCCTCCAACAGAGGAAAATT
AAGCTTCGCCTTGGCTCCGCGGAAGTCCCTGGCGGCCGCGTCGTACGCACGCGCCGCCTCTTCCGCCGTATCGAACGTCCCGAGCCACACGCGGCTCTTC
CGACTGGGATCACGGATCTCGGCGGCGTACCTCCCCCACGGCCTCTTCCGTACGCCCCTGTAGTGCATCTC