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Detailed information on CNT30563287


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404182Actinidia chinensisBeta vulgaris43.9739.1681.86204forward
CNT30491477Actinidia chinensisOlea europaea2537.1881.03116forward
CNT30711924Actinidia chinensisGlycine max44.1837.3483.41205forward
CNT30555769Actinidia chinensisOryza glaberrima22.8424.9484.91106forward
CNT30440702Actinidia chinensisAegilops tauschii37.2852.4282.08173forward
CNT30312764Actinidia chinensisCamelina sativa50.6562.3380.43235forward
CNT30212158Actinidia chinensisHelianthus annuus20.0423.9186.0293forward
CNT30129112Actinidia chinensisCorymbia citriodora32.9741.1384.31153forward
CNT30689644Actinidia chinensisTriticum urartu23.067.3485.05107forward
CNT30721908Actinidia chinensisTriticum spelta37.2854.5782.08173forward
CNT30478263Actinidia chinensisArabidopsis halleri16.1621.6886.6775forward
CNT30619828Actinidia chinensisCajanus cajan22.228.4588.35103forward
CNT30597233Actinidia chinensisOryza meridionalis21.5527.1785100forward
CNT30358925Actinidia chinensisLactuca sativa22.8427.7587.74106forward
CNT3027096Actinidia chinensisPopulus trichocarpa51.2968.3981.51238forward
CNT30323045Actinidia chinensisAsparagus officinalis20.6920.0486.4696forward
CNT30104304Actinidia chinensisOryza rufipogon22.8429.9484.91106forward
CNT30578494Actinidia chinensisOryza barthii22.8429.8684.91106forward
CNT30118019Actinidia chinensisOryza nivara22.8430.1185.85106forward
CNT30333329Actinidia chinensisCynara cardunculus23.0622.1186.92107forward
CNT3049510Actinidia chinensisCucumis sativus43.7550.2578.82203forward

Expression of CNT30563287

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MPTAAICFQMDDLKSAATFFKSSALLFPSQKDSNANLSSLFGPMRGYPTTWE

>peptide 2 (75 aa)
PTIASRDCKMLRDPTRSLAQMFLPSTTPAKRYLPDGNPPLIKSRVFVPRIRSKPKPVTPFRLVRVLNASAGTSAK*

>peptide 3 (35 aa)
MPQREHRQSKSRLEHSRLREMILAQSRQMYCWEYT*

>peptide 4 (33 aa)
HDSLKGLQDAERSNKVIGPDVSSVHYSSKEVFA*

Sequence

>CNT30563287
CCCACGATAGCCTCAAGGGACTGCAAGATGCTGAGAGATCCAACAAGGTCATTGGCCCAGATGTTTCTTCCGTCCACTACTCCAGCAAAGAGGTATTTGC
CTGATGGGAATCCACCCTTGATCAAATCAAGAGTCTTTGTTCCACGAATCAGATCAAAACCAAAACCTGTGACACCCTTCAGACTAGTGAGGGTTTTGAA
TGCCTCAGCGGGAACATCGGCAAAGTAAGTCTCGATTAGAACATTCACGCCTGAGAGAGATGATTCTAGCTCAGAGTAGGCAAATGTATTGCTGGGAATA
TACTTGATGCCGACAGCAGCCATCTGCTTCCAGATGGATGACCTTAAATCGGCCGCAACCTTTTTCAAATCCTCGGCACTGCTCTTCCCATCCCAGAAAG
ATTCTAACGCAAACTTAAGCTCTCTCTTTGGTCCCATGCGAGGATATCCAACAACGTGGGAGGC