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Detailed information on CNT30563209


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372997Actinidia chinensisArabidopsis thaliana21.139.7990.1471reverse complement
CNT3069056Actinidia chinensisQuercus suber40.1812.7786.67135reverse complement
CNT30526649Actinidia chinensisPhaseolus vulgaris22.9225.3392.2177reverse complement
CNT30632011Actinidia chinensisVigna unguiculata21.1311.4190.1471reverse complement
CNT3084405Actinidia chinensisVigna radiata21.1323.5994.3771reverse complement
CNT30172422Actinidia chinensisTrifolium pratense21.7323.190.4173reverse complement
CNT30143579Actinidia chinensisMedicago truncatula19.9422.1188.0667reverse complement
CNT30260145Actinidia chinensisBrassica rapa21.4323.8491.6772reverse complement
CNT30215606Actinidia chinensisHelianthus annuus47.9252.7981.99161reverse complement
CNT30128358Actinidia chinensisCorymbia citriodora30.3636.9687.25102forward
CNT30153204Actinidia chinensisPrunus persica22.3224.4386.6775reverse complement
CNT3026903Actinidia chinensisPopulus trichocarpa22.0224.3490.5474reverse complement
CNT30176610Actinidia chinensisVigna angularis23.2113.8892.3178reverse complement
CNT30724433Actinidia chinensisLupinus angustifolius21.1323.3690.1471reverse complement

Expression of CNT30563209

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SEMVINLLNNKKKSDCSIGPAPQAMRTKGCTVL*

Sequence

>CNT30563209
TAGTGAAATGGTAATTAATTTATTGAACAATAAAAAAAAAAGTGACTGTTCTATTGGGCCAGCCCCCCAGGCAATGCGGACCAAAGGGTGCACCGTCTTG
TGATCCGTCCACTGTCGAGAGAGGGAGGTTGTCGCTGCTCTGTGAAACCAGCCTCACGCTGTGCCCTCCTCTCTAGAGACCGCGTGGCCCAGGCCTTCGC
CCGAGACACACAGCCCAACTCCCAACTTGGACCGGGCAAGCCAGCAGACGCATCCCCCTGGGCCTGCCTGAAGGGGCCAGACCTTAGTCCAGTCACAGTA
ATGCCCTCACTCGAGTAACAGGCTGGCGTTACCCAG