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Detailed information on CNT30562914


BLAST search results

BLAST vs Swiss-Prot:
sp|P33628|TBA_PICAB, E-value = 2e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372848Actinidia chinensisArabidopsis thaliana33.2216.8383.17101forward
CNT30300679Actinidia chinensisTriticum aestivum65.7992.1784.5200forward
CNT30383102Actinidia chinensisTriticum turgidum53.9555.9783.54164forward
CNT3079816Actinidia chinensisBrassica juncea33.2236.7383.17101forward
CNT30135921Actinidia chinensisLolium perenne54.9344.4181.44167forward
CNT3065Actinidia chinensisZea mays65.7981.9781200forward
CNT30609153Actinidia chinensisGossypium raimondii58.8844.282.12179forward
CNT30648424Actinidia chinensisRosa chinensis61.8458.5779.79188forward
CNT30129276Actinidia chinensisCorymbia citriodora58.8842.8285.47179forward
CNT30716286Actinidia chinensisMalus domestica golden75.3317.5382.97229forward
CNT30719750Actinidia chinensisTriticum spelta78.2910081.93238forward
CNT30361585Actinidia chinensisSorghum bicolor30.9225.0784.0494forward
CNT30619808Actinidia chinensisCajanus cajan40.4620.6783.74123forward
CNT30359416Actinidia chinensisLactuca sativa71.0530.2183.8216forward
CNT3024647Actinidia chinensisPopulus trichocarpa27.316.0284.3483forward
CNT30331462Actinidia chinensisDioscorea rotundata67.1139.6980.39204forward
CNT30104286Actinidia chinensisOryza rufipogon38.4917.4982.05117forward
CNT30579614Actinidia chinensisEchinochloa crusgalli65.7950.6382200forward

Expression of CNT30562914

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MTVGSRSTKTARGTCFPAPVSLKKVLKASSPPPTVLSLGIWPSGCKMRKPTNEINNHTSSTKEN

>peptide 2 (99 aa)
LTGIMASGKVIGGVFLAADELLGMKQLAVRAGPHLVDDGGFQIHENRAWDVLSGSSLAEEGVKGVIAASDGLVARHLAIRLQNAKTHKRNQQSHFIHKGK

Sequence

>CNT30562914
TTCTTACTGGTATAATGGCCTCGGGCAAAGTTATTGGCGGCGTCTTCCTTGCCGCTGATGAGTTGCTCGGGATGAAACAATTGGCGGTACGCGCCGGTCC
TCACCTCGTCGATGACGGTGGGTTCCAGATCCACGAAAACCGCGCGTGGGACGTGCTTTCCGGCTCCAGTCTCGCTGAAGAAGGTGTTAAAGGCGTCATC
GCCGCCTCCGACGGTCTTGTCGCTAGGCATTTGGCCATCAGGCTGCAAAATGCGAAAACCCACAAACGAAATCAACAATCACACTTCATCCACAAAGGAA
AACA