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Detailed information on CNT3056240


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676994Amborella trichopodaSetaria viridis89.1651.190.2255forward
CNT30641660Amborella trichopodaNymphaea colorata87.4120.6398250reverse complement
CNT30536068Amborella trichopodaEucalyptus grandis87.417.2697.6250reverse complement
CNT30378667Amborella trichopodaArabidopsis thaliana38.819.9299.1111forward
CNT30500477Amborella trichopodaCoffea canephora87.4113.7398.4250forward
CNT30730500Amborella trichopodaCorchorus capsularis87.4121.0698.4250forward
CNT30381505Amborella trichopodaManihot esculenta63.2962.293.92181forward
CNT30403504Amborella trichopodaBeta vulgaris54.270.1496.77155reverse complement
CNT30525072Amborella trichopodaPhaseolus vulgaris49.333.0298.58141reverse complement
CNT30196411Amborella trichopodaPisum sativum87.4119.7694.8250forward
CNT30503431Amborella trichopodaNicotiana attenuata87.4118.198.4250reverse complement
CNT30709956Amborella trichopodaGlycine max84.6253.993.8242forward
CNT3044711Amborella trichopodaPrunus dulcis87.4152.4198.4250reverse complement
CNT30385182Amborella trichopodaTriticum turgidum89.1663.2894.12255reverse complement
CNT30588765Amborella trichopodaMusa acuminata87.4135.8298250reverse complement
CNT3087623Amborella trichopodaVigna radiata59.7982.2196.49171reverse complement
CNT30554009Amborella trichopodaOryza glaberrima88.1146.2492.46252forward
CNT30310298Amborella trichopodaCamelina sativa87.4116.3997.6250reverse complement
CNT3062651Amborella trichopodaArabidopsis lyrata82.5228.3797.46236reverse complement
CNT30266045Amborella trichopodaBrassica rapa39.8625.7391.23114forward
CNT30612440Amborella trichopodaArabis alpina75.1795.5694.88215forward
CNT30141326Amborella trichopodaLolium perenne47.240.6693.33135forward
CNT30357533Amborella trichopodaLactuca sativa87.4124.5698250forward
CNT30483432Amborella trichopodaChara braunii44.0661.7686.51126forward
CNT30412183Amborella trichopodaPapaver somniferum87.418.8898.4250forward
CNT30646402Amborella trichopodaCannabis sativa87.4119.7694.8250reverse complement
CNT30332807Amborella trichopodaDioscorea rotundata87.4115.1398250reverse complement
CNT30576679Amborella trichopodaOryza barthii89.1648.5792.55255forward

Expression of CNT3056240

Sequence

>CNT3056240
ATTTTGCGGCTATTTAAAGGCCTTATGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGAAGCCGTAGCGAAAACGAGTCT
TCATAGGGCAATTGTCACTGCTTATGGACCTGAACCTGGGTGATCTATCCATGACTAGGATGAAGCTTGGGTGAAACTAAGTGGAGGTCCGAACCGACTG
ATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCCGAATGAACGA