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Detailed information on CNT30562391


BLAST search results

BLAST vs Swiss-Prot:
sp|P12355|PSAF_SPIOL, E-value = 1e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30664845Actinidia chinensisTriticum dicoccoides45.2168.6177.62411forward

Expression of CNT30562391

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MYKNRIPGVMNSPQCLWSPLTIRWGSPSDPHSSPCFP*

>peptide 2 (62 aa)
MIPASSAAASPSSQTASTPCTASALICLPVPAEEEPLPTAGSTIAPLLLRVPAAVTMPLVVV*

>peptide 3 (84 aa)
MSASASGGGAPSDSRIDDSATAAESACSGDDASCSCLESDKHITLTLELNLDFWCLASGSLDRFVGIVRDIFCLFVFWREGFQG*

Sequence

>CNT30562391
ACCGGAAGGATGAAGGAATTAAACGGAGCTGTCGACTAGGTCTCCGTTGACCAACTCTCTGTAGGCGGCGACGGGCCAGCTAAAGCCTCTGAAGACGAGT
TTGGAGGCGAGAGGGACGTCGATGATGATCTCCTTCTGTGTTGGCTTCTTGTCGTCTCCGTTGACCAACTCTCTGTAGGCGGCGACGGGCCAGCTAAAGC
CTCTGAAGACGAGTTTGGAGGCGAGAGGGACGTCGATGATGATCTCCTTCTGTGTTGGCTTCTTGTCGTCTCGGATGGCGATGAGGTAGCTGCGTCCCAC
CCACCCAATCCACCCGGCTATGTATAAAAACAGAATCCCAGGGGTTATGAACTCTCCCCAGTGTCTCTGGTCCCCGCTCACTATTAGGTGGGGCAGCCCA
TCCGACCCACACAGCAGCCCCTGCTTCCCGTAGTTGTCGAACCTCCTCTTCGTCTTCTCCATCGTCGCCTTTATTGCCAGCGCCGGGGCGCTGTCCGGGG
CGTACAGCTTCAGCGATGATTCCAGCTTCTTCAGCTGCTGCTTCTCCCTCTTCGCAAACTGCTTCGACTCCTTGCACGGCGTCAGCCCTGATATGTCTGC
CAGTGCCAGCGGAGGAGGAGCCCCTTCCGACAGCAGGATCGACGATAGCGCCACTGCTGCTGAGAGTGCCTGCAGCGGTGACGATGCCTCTTGTAGTTGT
TTAGAGTCAGATAAGCATATCACCCTAACACTAGAACTAAACCTCGATTTTTGGTGCCTTGCAAGTGGTAGTTTGGATAGGTTTGTGGGAATTGTCAGAG
ACATTTTCTGTTTGTTTGTTTTTTGGAGGGAGGGGTTTCAAGGTTAGAGTGACAGAGATCAGAGAAGTGGGGAGAAGAAATTTGAGAGAAGAGGAGCGAG
TCTTTGCTT