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Detailed information on CNT30562388


BLAST search results

BLAST vs Swiss-Prot:
sp|P12355|PSAF_SPIOL, E-value = 2e-85

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525128Actinidia chinensisPhaseolus vulgaris17.1242.2382.97182forward
CNT30709051Actinidia chinensisGlycine max35.1845.5581.28374forward
CNT3086176Actinidia chinensisVigna radiata34.6245.4983.97368forward
CNT30623157Actinidia chinensisDaucus carota20.1321.6282.24214forward
CNT30684883Actinidia chinensisTriticum urartu20.8836.8879.73222forward

Expression of CNT30562388

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MYKNRIPGVMNSPQCLWSPLTIRWGSPSDPHSSPCFP*

>peptide 2 (37 aa)
MYKNRIPGVMNSPQCLWSPLTIRWGSPSDPHSSPCFP*

>peptide 3 (84 aa)
MSASASGGGAPSDSRIDDSATAAESACSGDDASCSCLESDKHITLTLELNLDFWCLASGSLDRFVGIVRDIFCLFVFWREGFQG*

>peptide 4 (62 aa)
MIPASSAAASPSSQTASTPCTASALICLPVPAEEEPLPTAGSTIAPLLLRVPAAVTMPLVVV*

Sequence

>CNT30562388
ACCGGAAGGATGAAGGAATTAAACGGAGCTGTCGACTAGGTCTCCGTTGACCAACTCTCTGTAGGCGGCGACGGGCCAGCTAAAGCCTCTGAAGACGAGT
TTGGAGGCGAGAGGGACGTCGATGATGATCTCCTTCTGTGTTGGCTTCTTGTCGTCTCGGATGGCGATGAGGTAGCTGCGTCCCACCCACCCAATCCACC
CGGCTATGTATAAAAACAGAATCCCAGGGGTTATGAACTCTCCCCAGTGTCTCTGGTCCCCGCTCACTATTAGGTGGGGCAGCCCATCCGACCCACACAG
CAGCCCCTGCTTCCCGTAGTTGTCGAACCTCCTCTTCGTCTTCTCCATCGTCGCCTTTATTGCCAGCGCCGGGGCGGCGACGGGCCAGCTAAAGCCTCTG
AAGACGAGTTTGGAGGCGAGAGGGACGTCGATGATGATCTCCTTCTGTGTTGGCTTCTTGTCGTCTCGGATGGCGATGAGGTAGCTGCGTCCCACCCACC
CAATCCACCCGGCTATGTATAAAAACAGAATCCCAGGGGTTATGAACTCTCCCCAGTGTCTCTGGTCCCCGCTCACTATTAGGTGGGGCAGCCCATCCGA
CCCACACAGCAGCCCCTGCTTCCCGTAGTTGTCGAACCTCCTCTTCGTCTTCTCCATCGTCGCCTTTATTGCCAGCGCCGGGGCGCTGTCCGGGGCGTAC
AGCTTCAGCGATGATTCCAGCTTCTTCAGCTGCTGCTTCTCCCTCTTCGCAAACTGCTTCGACTCCTTGCACGGCGTCAGCCCTGATATGTCTGCCAGTG
CCAGCGGAGGAGGAGCCCCTTCCGACAGCAGGATCGACGATAGCGCCACTGCTGCTGAGAGTGCCTGCAGCGGTGACGATGCCTCTTGTAGTTGTTTAGA
GTCAGATAAGCATATCACCCTAACACTAGAACTAAACCTCGATTTTTGGTGCCTTGCAAGTGGTAGTTTGGATAGGTTTGTGGGAATTGTCAGAGACATT
TTCTGTTTGTTTGTTTTTTGGAGGGAGGGGTTTCAAGGTTAGAGTGACAGAGATCAGAGAAGT