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Detailed information on CNT30562386


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 1e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678495Actinidia chinensisSetaria viridis16.4822.6783.3390forward
CNT30513785Actinidia chinensisJuglans regia40.2935.3783.64220forward
CNT30618119Actinidia chinensisSesamum indicum36.0838.482.74197forward
CNT3019440Actinidia chinensisCitrullus lanatus26.7438.5281.51146forward
CNT30629005Actinidia chinensisVigna unguiculata56.7853.1784.19310forward
CNT30300474Actinidia chinensisTriticum aestivum56.5928.1278.64309forward
CNT30394054Actinidia chinensisTriticum turgidum65.3836.177.87357forward
CNT30664762Actinidia chinensisTriticum dicoccoides65.3860.277.87357forward
CNT308929Actinidia chinensisZea mays17.5831.8983.3396forward
CNT30716553Actinidia chinensisMalus domestica golden60.2650.0879.03329forward
CNT30579105Actinidia chinensisEchinochloa crusgalli48.5325.0978.87265forward
CNT30174403Actinidia chinensisVigna angularis42.6733.5382.4233forward

Expression of CNT30562386

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MYKNRIPGVMNSPQCLWSPLTIRWGSPSDPHSSPCFP*

>peptide 2 (49 aa)
MMISFCVGFLSSRMAMRDVDDDLLLCWLLVVSDGDEVAASHPPNPPGYV*

Sequence

>CNT30562386
TCACCGGAAGGATGAAGGAATTAAACGGAGCTGTCGACTAGGTCTCCGTTGACCAACTCTCTGTAGGCGGCGACGGGCCAGCTAAAGCCTCTGAAGACGA
GTTTGGAGGCGAGAGGGACGTCGATGATGATCTCCTTCTGTGTTGGCTTCTTGTCGTCTCGGATGGCGATGAGGGACGTCGATGATGATCTCCTTCTGTG
TTGGCTTCTTGTCGTCTCGGATGGCGATGAGGTAGCTGCGTCCCACCCACCCAATCCACCCGGCTATGTATAAAAACAGAATCCCAGGGGTTATGAACTC
TCCCCAGTGTCTCTGGTCCCCGCTCACTATTAGGTGGGGCAGCCCATCCGACCCACACAGCAGCCCCTGCTTCCCGTAGTTGTCGAACCTCCTCTTCGTC
TTCTCCATCGTCGCCTTTATTGCCAGCGCCGGGGCGCTGTCCGGGGCGTACAGCTTCAGCGATGATTCCAGCTTCTTCAGCTGCTGCTTCTCCCTCTTCG
CAAACTGCTTCGACTCCTTGCACGGCGTCAGCCCTGATATGTCTGC