Detailed information on CNT30562314


BLAST search results

BLAST vs Swiss-Prot:
sp|P15762|RR19_SINAL, E-value = 5e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30198198Actinidia chinensisPisum sativum28.44.9797.1871forward
CNT30540533Actinidia chinensisBrassica napus10014.6483.6250reverse complement
CNT30447572Actinidia chinensisSaccharum spontaneum28.84.1893.0672forward
CNT30415027Actinidia chinensisPapaver somniferum42.827.4487.85107forward

Expression of CNT30562314

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MCHSLLLFFKYEERNSIFSLIYFYYGDEE*

>peptide 2 (38 aa)
MKKEILFSLLFTFTMVTKNKIITIFIPFSTSSSKCRITP

Sequence

>CNT30562314
CCTGCGACCAAGGTACTATTATTTCTTTTTCTGCTTTTGTATTAAGCTTATCAATTTTTCTTAATAAATGATTTGCTACAAAAGGATTTTTGCTTAGTGA
ATGTGTCACAGCCTCCTCCTTTTTTTTAAATATGAAGAAAGAAATTCTATTTTCTCTCTTATTTACTTTTACTATGGTGACGAAGAATAAAATTATCACT
ATATTTATTCCTTTTTCTACTTCTTCTTCCAAGTGCAGGATAACCCCAAG