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Detailed information on CNT30562281


BLAST search results

BLAST vs Swiss-Prot:
sp|P12333|CB2A_SPIOL, E-value = 2e-136

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629263Actinidia chinensisVigna unguiculata76.9957.2483.02589forward
CNT3055180Actinidia chinensisAmborella trichopoda70.7252.3781.33541forward

Expression of CNT30562281

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLQWITSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (32 aa)
MASLPFLISFTLSSAKASGSSARPNGSKLPPG*

>peptide 3 (47 aa)
MGRSFHRGKVDQQPHLAARQQYGSLQRLPSILLGKPKWQECFGRGSS*

Sequence

>CNT30562281
GCTTTTCTTGATGAGATAAGTCTGAAATTAAAAAGTAAAAGATTAAGAGAAATAGAAACTAGATCAAAATGAATACTATTCAAGCAGTTAAAACGGAAAA
TTGACATTTTTTGCATTACTACAATCCAATTTACATCACACACTTTCCAAATTCAAAACCCTCCTTTTAATTTCCCCTCACTTTCCGGGGACAAAGTTGG
TGGTCTGCCAAGTTCTCTAATGGTCCCTTTCCGGTCACTATGGCTTGAACAAAGAATCCAAACATAGAGAACATGGCAAGTCTACCATTCTTGATCTCCT
TTACCTTGAGCTCAGCAAAAGCCTCTGGGTCGTCAGCTAGGCCCAATGGGTCGAAGCTTCCACCGGGGTAAAGTGGATCAACAACCTCACCTAGCGGCCC
GCCAGCAATACGGTAGCCTTCAACGGCTCCCATCAATATTACTTGGCAAGCCCAAATGGCAAGAATGCTTTGGGCGTGGATCAAGCTAGGGTTGCCCAAG
TAGTCAAGCCCGCCCTCACTGAAGATCTGCGAACCGGCCTTGAACCATACAGCCTCACCGAACTTGACACCGTTGCGGGCCAAAAGCTCGGGAAAGACAC
AACCAAGAGCTCCAAGCATGGCCCATCTGCAGTGGATCACCTCCAGTTCACGGTTCTTGGCAAAGGTTTCAGGGTCAGCTGAAAGCCCAGCAGTATCCCA
ACCGTAGTCACCAGGGAATTCTCCGGTCAGGTAGGAGGGGGGATCACCAGATAGTGGGCCCAAGT