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Detailed information on CNT30562279


BLAST search results

BLAST vs Swiss-Prot:
sp|P13851|CB21_SINAL, E-value = 1e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524999Actinidia chinensisPhaseolus vulgaris60.9590.0283.98487forward
CNT30629403Actinidia chinensisVigna unguiculata62.0868.8982.86496forward
CNT30541861Actinidia chinensisBrassica napus43.358.7483.24346forward
CNT30234559Actinidia chinensisBrassica oleracea56.3261.982.22450forward

Expression of CNT30562279

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MASLPFLISFTLSSAKASGSSARVAQVVKPALTEDLRTGLEPYSLTELDTVAGQKLGKDTTKSSKHGPSAVDHLQFTVLGKGFRVS*

>peptide 2 (29 aa)
MAHLQWITSSSRFLAKVSGSAESPAVSQP*

Sequence

>CNT30562279
TAGATCAAAATGAATACTATTCAAGCAGTTAAAACGGAAAATTGACATTTTTTGCATTACTACAATCCAATTTACATCACACACTTTCCAAATTCAAAAC
CCTCCTTTTAATTTCCCCTCACTTTCCGGGGACAAAGTTGGTGGCATAAGCCCAGGCATTGTTGTTAACTGGGTCAGCAAGGTGGTCTGCCAAGTTCTCT
AATGGTCCCTTTCCGGTCACTATGGCTTGAACAAAGAATCCAAACATAGAGAACATGGCAAGTCTACCATTCTTGATCTCCTTTACCTTGAGCTCAGCAA
AAGCCTCTGGGTCGTCAGCTAGGGTTGCCCAAGTAGTCAAGCCCGCCCTCACTGAAGATCTGCGAACCGGCCTTGAACCATACAGCCTCACCGAACTTGA
CACCGTTGCGGGCCAAAAGCTCGGGAAAGACACAACCAAGAGCTCCAAGCATGGCCCATCTGCAGTGGATCACCTCCAGTTCACGGTTCTTGGCAAAGGT
TTCAGGGTCAGCTGAAAGCCCAGCAGTATCCCAACCGTAGTCACCAGGGAATTCTCCGGTCAGGTAGGAGGGGGGATCACCAGATAGTGGGCCCAAGTAT
AGAACTCGGTCTTTCCCATACCACGGGCTACCAGATGGCGTAGACTTGGTAGACTTCCTCGCGTTGACTTGGAAGACTCTTCGTGCACCAACGCTCTCCG
AGGTGGAAGGAGAGAGTTTGGTAGCCTTTCCGGCGAAAGAAGGTGAAGAGAGAGACATTGAGGCTGCCATGGTATAAGAGAAAGCTCTTGGTATTTGTT