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Detailed information on CNT30562195


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514098Actinidia chinensisJuglans regia13.2827.2781.48108forward
CNT30374560Actinidia chinensisArabidopsis thaliana29.0344.2879.24236forward
CNT30503966Actinidia chinensisNicotiana attenuata9.9622.0185.1981forward
CNT30146554Actinidia chinensisMedicago truncatula13.5329.6584.55110forward

Expression of CNT30562195

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGERSGDESGWGGRSIFCDLVESHPRALTREDKDQG*

>peptide 2 (84 aa)
MVMWPPMHAPKVTAGLTCPPEMLALMETATNKAKAWASAAETSPAGVVDPFFVILLKAIPEPSPAKTKIRVEMNSAKAALRAFG*

>peptide 3 (31 aa)
MVIDRHRPLMKIKWSRMQEMWIQERSLQLHTS

Sequence

>CNT30562195
TACCAAACGAAGACCAAGCCCTCAACTTTAGAGATGCTTGATCCATCAAAGTAATAGTAAGTAAACATAATTGTGATTTAGAGATGCTTGATCCATCAAA
GTAATAGTAAGTAAGAGAACTGATCAGACGGGCTCGAGCCCGTGGTATTATCACGGGCTTGTTTACGTGGCGCGCCCACATTTACCCATTTGGAGTGGAC
CCCACTTAAAAAAAATTAAAAAATTAAAAATAAAAATAATGAGGTCCATCCCAAATGGGTGGACGTAGGCGCGCCACGTAGACGAGTCCGTAATAATACA
ATGGGCTCTAGCCCGTTTGATTAGTTCTCTAGCAAGTAAACATAATTGTGAGGTTAACGGTAATAACAAACTCACCATGCCATCGGTGGCAAGCTTGAGG
AGCAAGCAGGCCCCGTAGAATGGTGATGTGGCCACCAATGCACGCACCGAAAGTGACAGCGGGGTTGACGTGTCCCCCAGAGATGTTAGCACTGATGGAG
ACAGCAACGAACAAAGCAAAGGCATGGGCGAGCGCAGCGGAGACGAGTCCGGCTGGGGTGGTAGATCCATTTTTTGTGATCTTGTTGAAAGCCATCCCCG
AGCCCTCACCCGCGAAGACAAAGATCAGGGTTGAGATGAACTCGGCCAAGGCTGCCTTGAGGGCGTTTGGGTGAGTCGCCTCCTCTCGCGTACCTACCGC
TATCCGTCGGTGGATATGGTAATTGATCGACATCGTCCTCTGATGAAAATCAAATGGTCAAGAATGCAAGAGATGTGGATACAGGAGAGGTCTCTACAGC
TACACACTAGCGG