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Detailed information on CNT30561789


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10HD0|CB23_ORYSJ, E-value = 4e-119

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512563Actinidia chinensisJuglans regia30.7922.6986.3343forward
CNT30625449Actinidia chinensisDaucus carota17.6821.4188.32197forward
CNT30360562Actinidia chinensisLactuca sativa27.2933.3786.84304forward
CNT30326027Actinidia chinensisAsparagus officinalis30.760.1184.5342forward
CNT30112551Actinidia chinensisFicus carica28.3751.0584.81316forward

Expression of CNT30561789

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MLWGALFTVRLMVKRVPPMGPTFLKNSFWRLKAVWPAKAACWIAEVAITLRSFFVAYVFSQWFVVGWCEEEEA

>peptide 2 (29 aa)
MAQREWITSSSRFLAKVSGSADSPAVSHP*

>peptide 3 (33 aa)
MMEFARRMGPSTLGGPAHTCVVAGSKMVRFKLC*

>peptide 4 (49 aa)
MAWTKNPNIENIASRPFLSSFTFNSANASGSSAQIARMLWAWTRLGFPR*

Sequence

>CNT30561789
TGACAATATAGATCTTAGATAACCAGTTTCTGCAAGTAATATTACATCAGTACTGATTCCATCCACAGGTAGAGAAACTCAATTACATCAAGAAGCTCTA
GTAATGTTTCAGCTCACTCTTCATTTTCCGGGTACGAAGTTAGTGGCATAAGCCCATGCATTGTTGGCCACAGGATCAGCAAGGTGGTCGGAAAGGTTCT
CAATTGGGCCCTTTCCAGTAACGATGGCCTGGACGAAGAATCCGAACATCGAAAACATTGCTAGCCGGCCATTCTTGAGCTCCTTCACCTTCAATTCTGC
AAATGCCTCTGGGTCATCGGCCCAGATCGCAAGGATGCTCTGGGCGTGGACGAGGTTAGGGTTTCCGAGGTAATCAAGGCCGCCTTCGGAGAAAATTTGG
GATCCGGCCTTGAACCAAACTGCCTCGCCGAACTTGACACCGTTCTTGGAAAGGATTTCAGGGAACACACAGCCCAGTGCACCGAGCATGGCCCAGCGGG
AGTGGATCACTTCGAGCTCACGGTTCTTGGCAAAGGTCTCGGGGTCAGCTGACAGCCCAGCAGTATCCCACCCGTAGTCACCGGGGAATTCACCTGTCAA
GTATGATGGAGTTTGCTCGGAGAATGGGCCCAAGTACTTTGGGCGGTCCGGCCCATACCTGTGTAGTTGCAGGGTCAAAAATGGTCAGATTCAAATTGTG
TTGAGAGTCGAGACAAGGATAACTAGATCAATTTATATATTCATAACTTTGATTTCTAGTGCTATTGGATTCGTGACAAGTTGTGTGCATTTTAAAAGCT
GCTAATGAAAGCGCGATAAGCTATACCGGCTAAATCAGTGAAACTTGTAATACAGATGTTATATTGATAACTACATATATTATTCAAGTTACCATATGCT
TTGGGGAGCACTTTTCACGGTGCGTCTCATGGTGAAACGGGTACCACCAATGGGTCCGACCTTCCTGAAGAACTCATTCTGGCGACTCAAAGCCGTCTGG
CCGGCAAAGGCTGCGTGTTGGATAGCGGAGGTCGCCATTACTCTGCGGAGCTTCTTTGTTGCTTATGTTTTTTCACAATGGTTTGTTGTAGGATGGTGTG
AAGAAGAAGAAGCC